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Lmbrd2 Gene Detail
Summary
  • Symbol
    Lmbrd2
  • Name
    LMBR1 domain containing 2
  • Synonyms
    9930036E21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444173
    NCBI Gene: 320506
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr15:9140637-9202569 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 3.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1478 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444173
 protein coding gene Chr15:9140622-9202569 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021712
 protein coding gene Chr15:6223690-6290789 (+)
A/J MGP_AJ_G0021672
 protein coding gene Chr15:6058166-6117331 (+)
AKR/J MGP_AKRJ_G0021650
 protein coding gene Chr15:6115850-6173926 (+)
BALB/cJ MGP_BALBcJ_G0021679
 protein coding gene Chr15:5967595-6026514 (+)
C3H/HeJ MGP_C3HHeJ_G0021455
 protein coding gene Chr15:6167942-6228009 (+)
C57BL/6NJ MGP_C57BL6NJ_G0022118
 protein coding gene Chr15:6435220-6499884 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0019655
 protein coding gene Chr15:5624699-5679163 (+)
CAST/EiJ MGP_CASTEiJ_G0020971
 protein coding gene Chr15:6172982-6235256 (+)
CBA/J MGP_CBAJ_G0021424
 protein coding gene Chr15:6587257-6658943 (+)
DBA/2J MGP_DBA2J_G0021548
 protein coding gene Chr15:5938620-6002813 (+)
FVB/NJ MGP_FVBNJ_G0021526
 protein coding gene Chr15:5864734-5925187 (+)
LP/J MGP_LPJ_G0021616
 protein coding gene Chr15:6149299-6209353 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0021551
 protein coding gene Chr15:6829872-6892798 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0022141
 protein coding gene Chr15:6177554-6238687 (+)
PWK/PhJ MGP_PWKPhJ_G0020714
 protein coding gene Chr15:5998011-6055441 (+)
SPRET/EiJ MGP_SPRETEiJ_G0020552
 protein coding gene Chr15:6055244-6117049 (+)
WSB/EiJ MGP_WSBEiJ_G0021027
 protein coding gene Chr15:6108203-6168945 (+)



Homology
more
  • Human Ortholog
    LMBRD2, LMBR1 domain containing 2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LMBRD2, LMBR1 domain containing 2
  • Synonyms
    DENBA
  • Links
    NCBI Gene ID: 92255
    neXtProt AC: NX_Q68DH5
    UniProt: Q68DH5

  • Chr Location
    5p13.2; chr5:36098407-36151887 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    4
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    751
  • Tissues
    10
  • cDNA Data
    20
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039704 Ensembl Gene Model | MGI Sequence Detail 61933 C57BL/6J ±  kb
transcript ENSMUST00000227556 Ensembl | MGI Sequence Detail 8098 Not Applicable  
polypeptide ENSMUSP00000154020 Ensembl | MGI Sequence Detail 694 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000029597 G-protein coupled receptor-associated protein LMBRD2
    (term hierarchy)
  • InterPro Domains
    IPR051584 GPCR-associated LMBR1 domain-containing protein
    IPR006876 LMBR1-like membrane protein
  • GlyGen
    Q8C561 2 sites, 2 N-linked glycans (2 sites)
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 1
References
more
  • Summaries
    All 27
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory