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Ankrd54 Gene Detail
Summary
  • Symbol
    Ankrd54
  • Name
    ankyrin repeat domain 54
  • Synonyms
    C730048E16Rik, Liar
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444209
    NCBI Gene: 223690
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:78937294-78947093 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 37.70 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    314 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444209
 protein coding gene Chr15:78937294-78947129 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022062
 protein coding gene Chr15:79307501-79317293 (-)
A/J MGP_AJ_G0022023
 protein coding gene Chr15:76568947-76578746 (-)
AKR/J MGP_AKRJ_G0021998
 protein coding gene Chr15:78689411-78699208 (-)
BALB/cJ MGP_BALBcJ_G0022029
 protein coding gene Chr15:76540870-76550669 (-)
C3H/HeJ MGP_C3HHeJ_G0021800
 protein coding gene Chr15:78692786-78702585 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022472
 protein coding gene Chr15:82416921-82426720 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020002
 protein coding gene Chr15:73049906-73060603 (-)
CAST/EiJ MGP_CASTEiJ_G0021321
 protein coding gene Chr15:79384628-79394449 (-)
CBA/J MGP_CBAJ_G0021765
 protein coding gene Chr15:84975515-84985314 (-)
DBA/2J MGP_DBA2J_G0021894
 protein coding gene Chr15:76046973-76056772 (-)
FVB/NJ MGP_FVBNJ_G0021872
 protein coding gene Chr15:75066288-75076087 (-)
LP/J MGP_LPJ_G0021962
 protein coding gene Chr15:79495250-79505042 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0021892
 protein coding gene Chr15:90127622-90137414 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022486
 protein coding gene Chr15:78712001-78721800 (-)
PWK/PhJ MGP_PWKPhJ_G0021063
 protein coding gene Chr15:76052749-76062685 (-)
SPRET/EiJ MGP_SPRETEiJ_G0020900
 protein coding gene Chr15:78511463-78521277 (-)
WSB/EiJ MGP_WSBEiJ_G0021373
 protein coding gene Chr15:79091305-79101104 (-)



Homology
more
  • Human Ortholog
    ANKRD54, ankyrin repeat domain 54
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ANKRD54, ankyrin repeat domain 54
  • Synonyms
    LIAR
  • Links
    NCBI Gene ID: 129138
    neXtProt AC: NX_Q6NXT1
    UniProt: Q6NXT1

  • Chr Location
    22q13.1; chr22:37830855-37849341 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    25 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    20
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    766
  • Tissues
    46
  • cDNA Data
    66
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000033055 Ensembl Gene Model | MGI Sequence Detail 9800 C57BL/6J ±  kb
transcript ENSMUST00000040676 Ensembl | MGI Sequence Detail 1904 Not Applicable  
polypeptide ENSMUSP00000047042 Ensembl | MGI Sequence Detail 299 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 68
    cDNA 68

    Microarray probesets 4
Other
Accession IDs
less
MGI:1349386, MGI:1349445
References
more
  • Summaries
    All 50
    Developmental Gene Expression 3
    Diseases 1
    Gene Ontology 2
    Phenotypes 25
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory