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9530056K15Rik Gene Detail
Summary
  • Symbol
    9530056K15Rik
  • Name
    RIKEN cDNA 9530056K15 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444456
    NCBI Gene: 320650
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:143379444-143385318 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 82.12 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    291 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444456
 lncRNA gene Chr5:143379444-143385318 (-)
129S1/SvImJ MGP_129S1SvImJ_G0001832
 unclassified gene Chr5:148727163-148729379 (-)
A/J MGP_AJ_G0001809
 unclassified gene Chr5:142348892-142351207 (-)
AKR/J MGP_AKRJ_G0001796
 unclassified gene Chr5:146800977-146803193 (-)
BALB/cJ MGP_BALBcJ_G0001806
 unclassified gene Chr5:143594872-143597187 (-)
C3H/HeJ MGP_C3HHeJ_G0001783
 unclassified gene Chr5:147617084-147619399 (-)
C57BL/6NJ MGP_C57BL6NJ_G0001927
 unclassified gene Chr5:154161483-154163798 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0001589
 unclassified gene Chr5:136124727-136126849 (-)
CAST/EiJ MGP_CASTEiJ_G0001753
 unclassified gene Chr5:147112449-147114612 (-)
CBA/J MGP_CBAJ_G0001776
 unclassified gene Chr5:160518316-160520560 (-)
DBA/2J MGP_DBA2J_G0001780
 unclassified gene Chr5:142113062-142115377 (-)
FVB/NJ MGP_FVBNJ_G0001788
 unclassified gene Chr5:141325175-141327490 (-)
LP/J MGP_LPJ_G0001835
 unclassified gene Chr5:149328720-149330936 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0001769
 unclassified gene Chr5:162910398-162912642 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0001916
 unclassified gene Chr5:146657609-146659924 (-)
PWK/PhJ MGP_PWKPhJ_G0001714
 unclassified gene Chr5:141197633-141199996 (-)
SPRET/EiJ MGP_SPRETEiJ_G0001680
 unclassified gene Chr5:144393174-144395287 (-)
WSB/EiJ MGP_WSBEiJ_G0001776
 unclassified gene Chr5:147446087-147448402 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    24
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045345 Ensembl Gene Model | MGI Sequence Detail 5875 C57BL/6J ±  kb
transcript ENSMUST00000197918 Ensembl | MGI Sequence Detail 2631 Not Applicable  
polypeptide Q8CBR2 UniProt | EBI | MGI Sequence Detail 137 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    Genomic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 9
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory