C430014B12Rik Gene Detail

Summary

• Symbol
  C430014B12Rik
• Name
  RIKEN cDNA C430014B12 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:2444820
  NCBI Gene: 105243964
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:82669649-82702890 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 42.42 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  876 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2444820	lncRNA gene	Chr1:82669228-82703614 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015104	unclassified non-coding RNA gene	Chr1:83614133-83646270 (-)
A/J	MGP_AJ_G0015077	unclassified non-coding RNA gene	Chr1:80647833-80677820 (-)
AKR/J	MGP_AKRJ_G0015040	unclassified non-coding RNA gene	Chr1:82841838-82876517 (-)
BALB/cJ	MGP_BALBcJ_G0015040	unclassified non-coding RNA gene	Chr1:80709671-80821529 (-)
C3H/HeJ	MGP_C3HHeJ_G0014863	unclassified non-coding RNA gene	Chr1:83224808-83257214 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015497	unclassified non-coding RNA gene	Chr1:86838264-86872748 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013243	unclassified non-coding RNA gene	Chr1:75869396-75900224 (-)
CAST/EiJ	MGP_CASTEiJ_G0014418	unclassified non-coding RNA gene	Chr1:82647268-82678046 (-)
CBA/J	MGP_CBAJ_G0014842	unclassified non-coding RNA gene	Chr1:89622867-89660208 (-)
DBA/2J	MGP_DBA2J_G0014935	unclassified non-coding RNA gene	Chr1:79936001-79965478 (-)
FVB/NJ	MGP_FVBNJ_G0014947	unclassified non-coding RNA gene	Chr1:79031492-79061524 (-)
LP/J	MGP_LPJ_G0015018	unclassified non-coding RNA gene	Chr1:84728587-84761780 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014974	unclassified non-coding RNA gene	Chr1:93023696-93055936 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015535	unclassified non-coding RNA gene	Chr1:83010808-83041951 (-)
PWK/PhJ	MGP_PWKPhJ_G0014210	unclassified non-coding RNA gene	Chr1:79375563-79407048 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013999	unclassified non-coding RNA gene	Chr1:82210374-82240315 (-)
WSB/EiJ	MGP_WSBEiJ_G0014522	unclassified non-coding RNA gene	Chr1:82808996-82843224 (-)

Homology

• Gene Tree
  C430014B12Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving C430014B12Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000097564 (Evidence)
• NCBI Gene
  105243964

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097564	Ensembl Gene Model | MGI Sequence Detail	33242	C57BL/6J
transcript	ENSMUST00000187869	Ensembl | MGI Sequence Detail	3377	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 10

  Phenotypes 4
• Earliest
  J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
• Latest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573