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B230217O12Rik Gene Detail
Summary
  • Symbol
    B230217O12Rik
  • Name
    RIKEN cDNA B230217O12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2444948
    NCBI Gene: 320879
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:57311625-57349303 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 52.20 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1492 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444948
 lncRNA gene Chr19:57311625-57349331 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005846
 lincRNA gene Chr19:57735746-57783761 (-)
A/J MGP_AJ_G0005838
 lincRNA gene Chr19:54882447-54919193 (-)
AKR/J MGP_AKRJ_G0005813
 lincRNA gene Chr19:56608147-56647663 (-)
BALB/cJ MGP_BALBcJ_G0005817
 lincRNA gene Chr19:54961270-54997737 (-)
C3H/HeJ MGP_C3HHeJ_G0005764
 lincRNA gene Chr19:56842229-56880456 (-)
C57BL/6NJ MGP_C57BL6NJ_G0005977
 lincRNA gene Chr19:59106375-59158486 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005316
 lincRNA gene Chr19:53798271-53832748 (-)
CAST/EiJ MGP_CASTEiJ_G0005701
 lincRNA gene Chr19:56886320-56930239 (-)
CBA/J MGP_CBAJ_G0005749
 lincRNA gene Chr19:62033043-62076293 (-)
DBA/2J MGP_DBA2J_G0005770
 lincRNA gene Chr19:54656453-54693985 (-)
FVB/NJ MGP_FVBNJ_G0005796
 lincRNA gene Chr19:54375442-54418067 (-)
LP/J MGP_LPJ_G0005850
 lincRNA gene Chr19:57576549-57621555 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005783
 lincRNA gene Chr19:61274762-61320169 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0005974
 lincRNA gene Chr19:56812825-56858624 (-)
PWK/PhJ MGP_PWKPhJ_G0005650
 lincRNA gene Chr19:54632885-54675551 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005563
 lincRNA gene Chr19:55509958-55550838 (-)
WSB/EiJ MGP_WSBEiJ_G0005754
 lincRNA gene Chr19:56953727-56997611 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
  • All Sequences
    32
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000097785 Ensembl Gene Model | MGI Sequence Detail 37679 C57BL/6J ±  kb
transcript ENSMUST00000241582 Ensembl | MGI Sequence Detail 2513 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 13
    Phenotypes 3
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory