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A230107N01Rik Gene Detail
Summary
  • Symbol
    A230107N01Rik
  • Name
    RIKEN cDNA A230107N01 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2445042
    NCBI Gene: 320919
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr13:84367700-84370294 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 44.20 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    123 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445042
 lncRNA gene Chr13:84367700-84370294 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003202
 antisense lncRNA gene Chr13:85113270-85115863 (-)
A/J MGP_AJ_G0003178
 antisense lncRNA gene Chr13:82123971-82126565 (-)
AKR/J MGP_AKRJ_G0003160
 antisense lncRNA gene Chr13:84568259-84570853 (-)
BALB/cJ MGP_BALBcJ_G0003165
 antisense lncRNA gene Chr13:82679250-82681843 (-)
C3H/HeJ MGP_C3HHeJ_G0003121
 antisense lncRNA gene Chr13:84267424-84270017 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003308
 antisense lncRNA gene Chr13:87819967-87822561 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002835
 antisense lncRNA gene Chr13:78471219-78473788 (-)
CAST/EiJ MGP_CASTEiJ_G0003088
 antisense lncRNA gene Chr13:83377588-83380179 (-)
CBA/J MGP_CBAJ_G0003118
 antisense lncRNA gene Chr13:91153461-91156054 (-)
DBA/2J MGP_DBA2J_G0003123
 antisense lncRNA gene Chr13:81771505-81774099 (-)
FVB/NJ MGP_FVBNJ_G0003141
 antisense lncRNA gene Chr13:80818010-80820604 (-)
LP/J MGP_LPJ_G0003199
 antisense lncRNA gene Chr13:85334725-85337319 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003132
 antisense lncRNA gene Chr13:90432955-90435548 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003309
 antisense lncRNA gene Chr13:83944854-83947448 (-)
PWK/PhJ MGP_PWKPhJ_G0003045
 antisense lncRNA gene Chr13:80686065-80688656 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002992
 antisense lncRNA gene Chr13:80274653-80277260 (-)
WSB/EiJ MGP_WSBEiJ_G0003121
 antisense lncRNA gene Chr13:84401343-84403936 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    30
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 320919 NCBI Gene Model | MGI Sequence Detail 2595 C57BL/6J ±  kb
transcript NR_138587 RefSeq | MGI Sequence Detail 2348 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 3
References
more
  • Summaries
    All 13
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory