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6430571L13Rik Gene Detail
Summary
  • Symbol
    6430571L13Rik
  • Name
    RIKEN cDNA 6430571L13 gene
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445137
    NCBI Gene: 235599
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:107217839-107226882 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 58.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    316 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445137
 protein coding gene Chr9:107217801-107229621 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035251
 protein coding gene Chr9:109197017-109209451 (+)
A/J MGP_AJ_G0035230
 protein coding gene Chr9:105236031-105247281 (+)
AKR/J MGP_AKRJ_G0035162
 protein coding gene Chr9:107860122-107871430 (+)
BALB/cJ MGP_BALBcJ_G0035224
 protein coding gene Chr9:104905379-104916671 (+)
C3H/HeJ MGP_C3HHeJ_G0034934
 protein coding gene Chr9:108258092-108270375 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035744
 protein coding gene Chr9:112200015-112215900 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032642
 protein coding gene Chr9:102664716-102676457 (+)
CAST/EiJ MGP_CASTEiJ_G0034245
 protein coding gene Chr9:108190889-108204089 (+)
CBA/J MGP_CBAJ_G0034902
 protein coding gene Chr9:116173493-116185116 (+)
DBA/2J MGP_DBA2J_G0035063
 protein coding gene Chr9:104689511-104701775 (+)
FVB/NJ MGP_FVBNJ_G0035011
 protein coding gene Chr9:103451587-103464006 (+)
LP/J MGP_LPJ_G0035139
 protein coding gene Chr9:109406704-109419651 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035050
 protein coding gene Chr9:117763200-117777550 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035765
 protein coding gene Chr9:108125841-108137179 (+)
PWK/PhJ MGP_PWKPhJ_G0033952
 protein coding gene Chr9:105003380-105016858 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033787
 protein coding gene Chr9:108192196-108205648 (+)
WSB/EiJ MGP_WSBEiJ_G0034366
 protein coding gene Chr9:108013220-108026852 (+)



Homology
more
  • Human Ortholog
    C3orf18, chromosome 3 open reading frame 18
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C3orf18, chromosome 3 open reading frame 18
  • Synonyms
    G20
  • Links
    NCBI Gene ID: 51161
    neXtProt AC: NX_Q9UK00
    UniProt: Q9UK00

  • Chr Location
    3p21.31; chr3:50558025-50574700 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    12
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 235599 NCBI Gene Model | MGI Sequence Detail 9044 C57BL/6J ±  kb
transcript NM_175486 RefSeq | MGI Sequence Detail 2565 C57BL/6  
polypeptide Q8BGK9 UniProt | EBI | MGI Sequence Detail 164 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    Genomic 1
    cDNA 12

    Microarray probesets 4
References
more
  • Summaries
    All 20
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory