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Ttc34 Gene Detail
Summary
  • Symbol
    Ttc34
  • Name
    tetratricopeptide repeat domain 34
  • Synonyms
    B230396O12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445205
    NCBI Gene: 242800
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:154921916-154951584 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 85.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    817 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445205
 protein coding gene Chr4:154921871-154951584 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029199
 protein coding gene Chr4:159131059-159148313 (+)
A/J MGP_AJ_G0029164
 protein coding gene Chr4:152450206-152470665 (+)
AKR/J MGP_AKRJ_G0029112
 protein coding gene Chr4:156609359-156626409 (+)
BALB/cJ MGP_BALBcJ_G0029180
 protein coding gene Chr4:152920005-152937301 (+)
C3H/HeJ MGP_C3HHeJ_G0028901
 protein coding gene Chr4:157147600-157163365 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029629
 protein coding gene Chr4:164809247-164830614 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026875
 protein coding gene Chr4:144759777-144769888 (+)
CAST/EiJ MGP_CASTEiJ_G0028314
 protein coding gene Chr4:154568758-154586020 (+)
CBA/J MGP_CBAJ_G0028863
 protein coding gene Chr4:169752593-169771398 (+)
DBA/2J MGP_DBA2J_G0029012
 protein coding gene Chr4:152478466-152495869 (+)
FVB/NJ MGP_FVBNJ_G0028976
 protein coding gene Chr4:151693702-151710643 (+)
LP/J MGP_LPJ_G0029102
 protein coding gene Chr4:159051876-159068746 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029003
 protein coding gene Chr4:172640494-172657084 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029661
 protein coding gene Chr4:157197349-157214581 (+)
PWK/PhJ MGP_PWKPhJ_G0028034
 protein coding gene Chr4:148594422-148612650 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027868
 protein coding gene Chr4:151490312-151501598 (+)
WSB/EiJ MGP_WSBEiJ_G0028394
 protein coding gene Chr4:157366013-157383131 (+)



Homology
more
  • Human Ortholog
    TTC34, tetratricopeptide repeat domain 34
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TTC34, tetratricopeptide repeat domain 34
  • Links
    NCBI Gene ID: 100287898
    neXtProt AC: NX_A8MYJ7
    UniProt: A8MYJ7

  • Chr Location
    chr1:2636986-2801693 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046637 Ensembl Gene Model | MGI Sequence Detail 29669 C57BL/6J ±  kb
transcript ENSMUST00000207854 Ensembl | MGI Sequence Detail 4733 Not Applicable  
polypeptide ENSMUSP00000146409 Ensembl | MGI Sequence Detail 1063 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000031129 tetratricopeptide repeat protein 34
    (term hierarchy)
  • InterPro Domains
    IPR011990 Tetratricopeptide-like helical domain superfamily
    IPR019734 Tetratricopeptide repeat
    IPR042161 Tetratricopeptide repeat protein 34
  • GlyGen
    Q8C0Q3 1 site, 1 O-linked glycan (1 site)
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 22
    Phenotypes 7
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:196071 van der Weyden L, et al., Cancer of mice and men: old twists and new tails. J Pathol. 2013 May;230(1):4-16
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory