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Eif2c5l Gene Detail
Summary
  • Symbol
    Eif2c5l
  • Name
    eukaryotic translation initiation factor 2C, 5
  • Synonyms
    Ago5, argonaute 5, Lnc10
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2446636
    NCBI Gene: 286951
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:139676984-139697629 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 61.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    641 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2446636
 lncRNA gene ChrX:139676948-139697693 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007566
 lincRNA gene ChrX:138346097-138367437 (+)
A/J MGP_AJ_G0007565
 lincRNA gene ChrX:137719883-137741883 (+)
AKR/J MGP_AKRJ_G0007535
 lincRNA gene ChrX:142128637-142155720 (+)
BALB/cJ MGP_BALBcJ_G0007539
 lincRNA gene ChrX:136025141-136047730 (+)
C3H/HeJ MGP_C3HHeJ_G0007486
 lincRNA gene ChrX:138354852-138374738 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007712
 lincRNA gene ChrX:142376826-142395370 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006888
 lincRNA gene ChrX:129425105-129444306 (+)
CAST/EiJ MGP_CASTEiJ_G0007388
 lincRNA gene ChrX:119167556-119186304 (+)
CBA/J MGP_CBAJ_G0007467
 lincRNA gene ChrX:146767251-146794851 (+)
DBA/2J MGP_DBA2J_G0007492
 lincRNA gene ChrX:136850182-136872732 (+)
FVB/NJ MGP_FVBNJ_G0007508
 lincRNA gene ChrX:136084609-136104845 (+)
LP/J MGP_LPJ_G0007572
 lincRNA gene ChrX:139282667-139301818 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007487
 lincRNA gene ChrX:154290989-154316734 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007715
 lincRNA gene ChrX:137647026-137671056 (+)
PWK/PhJ MGP_PWKPhJ_G0007325
 lincRNA gene ChrX:116060766-116082950 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007229
 lincRNA gene ChrX:119720659-119737606 (+)
WSB/EiJ MGP_WSBEiJ_G0007449
 lincRNA gene ChrX:135962132-135987918 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085146 Ensembl Gene Model | MGI Sequence Detail 20646 C57BL/6J ±  kb
transcript ENSMUST00000125609 Ensembl | MGI Sequence Detail 1416 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 11
    Gene Ontology 1
  • Earliest
    J:79881 Carmell MA, et al., The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis. Genes Dev. 2002 Nov 1;16(21):2733-42
  • Latest
    J:336738 Li K, et al., A long noncoding RNA binding to QKI-5 regulates germ cell apoptosis via p38 MAPK signaling pathway. Cell Death Dis. 2019 Sep 20;10(10):699
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory