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BC030500 Gene Detail
Summary
  • Symbol
    BC030500
  • Name
    cDNA sequence BC030500
  • Synonyms
    MGC:40983
  • Feature Type
    protein coding gene
  • IDs
    MGI:2447770
    NCBI Gene: 234290
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:59364789-59367332 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 30.82 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    149 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2447770
 protein coding gene Chr8:59364789-59367332 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033627
 protein coding gene Chr8:58737885-58740427 (+)
A/J MGP_AJ_G0033609
 protein coding gene Chr8:56236929-56239470 (+)
AKR/J MGP_AKRJ_G0033534
 protein coding gene Chr8:57868869-57871397 (+)
BALB/cJ MGP_BALBcJ_G0033605
 protein coding gene Chr8:56512592-56515138 (+)
C3H/HeJ MGP_C3HHeJ_G0033315
 protein coding gene Chr8:58549446-58551992 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034122
 protein coding gene Chr8:60942116-60944658 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031070
 protein coding gene Chr8:51683538-51686073 (+)
CAST/EiJ MGP_CASTEiJ_G0032640
 protein coding gene Chr8:57960843-57963390 (+)
CBA/J MGP_CBAJ_G0033293
 protein coding gene Chr8:63203648-63206189 (+)
DBA/2J MGP_DBA2J_G0033447
 protein coding gene Chr8:55995120-55998106 (+)
FVB/NJ MGP_FVBNJ_G0033388
 protein coding gene Chr8:55348243-55350789 (+)
LP/J MGP_LPJ_G0033535
 protein coding gene Chr8:58699608-58702154 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033432
 protein coding gene Chr8:64999314-65001855 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034140
 protein coding gene Chr8:58139338-58141880 (+)
PWK/PhJ MGP_PWKPhJ_G0032349
 protein coding gene Chr8:55357881-55360421 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032185
 protein coding gene Chr8:57062413-57064950 (+)
WSB/EiJ MGP_WSBEiJ_G0032757
 protein coding gene Chr8:58434784-58437330 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Targeted
    1
  • Genomic Mutations
    1 involving BC030500
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    11 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 234290 NCBI Gene Model | MGI Sequence Detail 2544 C57BL/6J ±  kb
transcript NM_173411 RefSeq | MGI Sequence Detail 1605 C57BL/6  
polypeptide NP_775587 RefSeq | MGI Sequence Detail 123 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 3
References
more
  • Summaries
    All 18
    Phenotypes 3
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory