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Smagp Gene Detail
Summary
  • Symbol
    Smagp
  • Name
    small cell adhesion glycoprotein
  • Synonyms
    MGC:7903
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448476
    NCBI Gene: 207818
  • Alliance
    gene page
  • Transcription Start Sites
    9 TSS
Location &
Maps
more
  • Sequence Map
    Chr15:100519220-100534821 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 56.37 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    492 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448476
 protein coding gene Chr15:100519220-100534821 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022357
 protein coding gene Chr15:102603866-102621445 (-)
A/J MGP_AJ_G0022319
 protein coding gene Chr15:98560813-98576347 (-)
AKR/J MGP_AKRJ_G0022295
 protein coding gene Chr15:101573262-101588777 (-)
BALB/cJ MGP_BALBcJ_G0022323
 protein coding gene Chr15:98670373-98686990 (-)
C3H/HeJ MGP_C3HHeJ_G0022093
 protein coding gene Chr15:101651581-101667203 (-)
C57BL/6NJ MGP_C57BL6NJ_G0022771
 protein coding gene Chr15:106458256-106474009 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020296
 protein coding gene Chr15:94312527-94329134 (-)
CAST/EiJ MGP_CASTEiJ_G0021618
 protein coding gene Chr15:102503158-102518461 (-)
CBA/J MGP_CBAJ_G0022062
 protein coding gene Chr15:110098473-110116712 (-)
DBA/2J MGP_DBA2J_G0022189
 protein coding gene Chr15:97912250-97928014 (-)
FVB/NJ MGP_FVBNJ_G0022168
 protein coding gene Chr15:96933892-96952134 (-)
LP/J MGP_LPJ_G0022260
 protein coding gene Chr15:102760432-102775982 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022189
 protein coding gene Chr15:113830313-113847399 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0022785
 protein coding gene Chr15:101574427-101589889 (-)
PWK/PhJ MGP_PWKPhJ_G0021357
 protein coding gene Chr15:98044714-98060819 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021189
 protein coding gene Chr15:101463735-101480804 (-)
WSB/EiJ MGP_WSBEiJ_G0021668
 protein coding gene Chr15:102198539-102213996 (-)



Homology
more
  • Human Ortholog
    SMAGP, small cell adhesion glycoprotein
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SMAGP, small cell adhesion glycoprotein
  • Synonyms
    hSMAGP
  • Links
    NCBI Gene ID: 57228
    neXtProt AC: NX_Q0VAQ4
    UniProt: Q0VAQ4

  • Chr Location
    12q13.13; chr12:51244558-51270415 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    31 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    822
  • Tissues
    32
  • cDNA Data
    62
  • Literature Summary
    3
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 207818 NCBI Gene Model | MGI Sequence Detail 15602 C57BL/6J ±  kb
transcript NM_174992 RefSeq | MGI Sequence Detail 1220 C57BL/6  
polypeptide Q99KC7 UniProt | EBI | MGI Sequence Detail 97 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 63
    cDNA 62
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 55
    Developmental Gene Expression 3
    Diseases 1
    Gene Ontology 3
    Phenotypes 31
  • Earliest
    J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory