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Wscd1 Gene Detail
Summary
  • Symbol
    Wscd1
  • Name
    WSC domain containing 1
  • Synonyms
    MGC:55022
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448493
    NCBI Gene: 216881
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:71640746-71680473 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 43.62 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1082 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448493
 protein coding gene Chr11:71640719-71680475 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018626
 protein coding gene Chr11:72348255-72387960 (+)
A/J MGP_AJ_G0018594
 protein coding gene Chr11:69646334-69686525 (+)
AKR/J MGP_AKRJ_G0018563
 protein coding gene Chr11:71761685-71801388 (+)
BALB/cJ MGP_BALBcJ_G0018566
 protein coding gene Chr11:69934637-69974804 (+)
C3H/HeJ MGP_C3HHeJ_G0018379
 protein coding gene Chr11:71720041-71760827 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019017
 protein coding gene Chr11:74539703-74579428 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016660
 protein coding gene Chr11:66492725-66532022 (+)
CAST/EiJ MGP_CASTEiJ_G0017934
 protein coding gene Chr11:72081796-72149071 (+)
CBA/J MGP_CBAJ_G0018351
 protein coding gene Chr11:77851391-77890879 (+)
DBA/2J MGP_DBA2J_G0018460
 protein coding gene Chr11:69288511-69328718 (+)
FVB/NJ MGP_FVBNJ_G0018451
 protein coding gene Chr11:68813627-68854185 (+)
LP/J MGP_LPJ_G0018531
 protein coding gene Chr11:72860365-72901153 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018474
 protein coding gene Chr11:78448280-78488027 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019059
 protein coding gene Chr11:71971332-72012445 (+)
PWK/PhJ MGP_PWKPhJ_G0017707
 protein coding gene Chr11:69901448-69965296 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017497
 protein coding gene Chr11:71672555-71711957 (+)
WSB/EiJ MGP_WSBEiJ_G0017988
 protein coding gene Chr11:71702493-71742815 (+)



Homology
more
  • Human Ortholog
    WSCD1, WSC domain containing 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    WSCD1, WSC domain containing 1
  • Links
    NCBI Gene ID: 23302
    neXtProt AC: NX_Q658N2
    UniProt: Q658N2

  • Chr Location
    17p13.2; chr17:6057807-6124427 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    918
  • Tissues
    47
  • cDNA Data
    25
  • Literature Summary
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020811 Ensembl Gene Model | MGI Sequence Detail 39728 C57BL/6J ±  kb
transcript ENSMUST00000108510 Ensembl | MGI Sequence Detail 2956 Not Applicable  
polypeptide ENSMUSP00000104150 Ensembl | MGI Sequence Detail 572 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 26
    cDNA 26

    Microarray probesets 4
References
more
  • Summaries
    All 40
    Developmental Gene Expression 5
    Gene Ontology 1
    Phenotypes 14
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory