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Crxos Gene Detail
Summary
  • Symbol
    Crxos
  • Name
    cone-rod homeobox, opposite strand
  • Synonyms
    Crxos1, Egam1
Location &
Maps
more
  • Sequence Map
    Chr7:15616542-15637945 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 8.60 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    695 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2451355
 protein coding gene Chr7:15616542-15637945 (+)
129S1/SvImJ MGP_129S1SvImJ_G0031692
 protein coding gene Chr7:13509004-13538234 (+)
A/J MGP_AJ_G0031664
 protein coding gene Chr7:13335455-13355944 (+)
AKR/J MGP_AKRJ_G0031589
 protein coding gene Chr7:13630735-13650037 (+)
BALB/cJ MGP_BALBcJ_G0031671
 protein coding gene Chr7:13444623-13447623 (+)
C3H/HeJ MGP_C3HHeJ_G0031393
 protein coding gene Chr7:13799136-13821845 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032137
 protein coding gene Chr7:14274205-14284468 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029216
 protein coding gene Chr7:14912126-14918825 (+)
CAST/EiJ MGP_CASTEiJ_G0030744
 protein coding gene Chr7:10572307-10597172 (+)
CBA/J MGP_CBAJ_G0031352
 protein coding gene Chr7:14724538-14726910 (+)
DBA/2J MGP_DBA2J_G0031508
 protein coding gene Chr7:13215115-13239138 (+)
FVB/NJ MGP_FVBNJ_G0031464
 protein coding gene Chr7:13105093-13123741 (+)
LP/J MGP_LPJ_G0031593
 protein coding gene Chr7:13791729-13814681 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031499
 protein coding gene Chr7:14670200-14691450 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032166
 protein coding gene Chr7:13397158-13422301 (+)
PWK/PhJ MGP_PWKPhJ_G0030468
 protein coding gene Chr7:10731730-10754351 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030296
 protein coding gene Chr7:8337489-8349584 (+)
WSB/EiJ MGP_WSBEiJ_G0030841
 protein coding gene Chr7:13445356-13469251 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    11
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    771
  • Tissues
    56
  • cDNA Data
    18
  • Literature Summary
    9
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 546024 NCBI Gene Model | MGI Sequence Detail 21404 C57BL/6J ±  kb
transcript NR_038092 RefSeq | MGI Sequence Detail 2251 C57BL/6  
polypeptide Q3UL53 UniProt | EBI | MGI Sequence Detail 246 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR050720 Engrailed Homeobox Transcription Factors
    IPR001356 Homeobox domain
    IPR009057 Homeobox-like domain superfamily
Molecular
Reagents
less
  • All nucleic 22
    cDNA 18
    Primer pair 4

    Microarray probesets 4
Other
Accession IDs
less
MGI:3584364
References
more
  • Summaries
    All 43
    Developmental Gene Expression 9
    Gene Ontology 11
    Phenotypes 6
  • Earliest
    J:47659 Sasaki N, et al., Characterization of gene expression in mouse blastocyst using single-pass sequencing of 3995 clones. (Errata 1998;54:583). Genomics. 1998 Apr 15;49(2):167-79
  • Latest
    J:244597 Cui W, et al., Towards Functional Annotation of the Preimplantation Transcriptome: An RNAi Screen in Mammalian Embryos. Sci Rep. 2016 Nov 21;6:37396
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory