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BC005685 Gene Detail
Summary
  • Symbol
    BC005685
  • Name
    cDNA sequence BC005685
  • Feature Type
    protein coding gene
  • IDs
    MGI:2655157
    NCBI Gene: 352945
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:46577210-46578786 bp, + strand
    From MGI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    121 from dbSNP Build 142
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2655157
 protein coding gene Chr4:46577210-46578786 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    22
  • Tissues
    22
  • cDNA Data
    3
  • Literature Summary
    1
  • Other Mouse Links
    GEO
Sequences &
Gene Models
less
  • All Sequences
    5
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
transcript BC005685 GenBank | ENA | DDBJ | MGI Sequence Detail 1579 Not Specified  
polypeptide Q99J11 UniProt | EBI | MGI Sequence Detail 404 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR050195 Primate lentivirus group Gag polyprotein
    IPR045345 Retroviral nucleocapsid Gag protein p24, C-terminal domain
    IPR008916 Retrovirus capsid, C-terminal
    IPR008919 Retrovirus capsid, N-terminal
    IPR001878 Zinc finger, CCHC-type
    IPR036875 Zinc finger, CCHC-type superfamily
Molecular
Reagents
less
  • All nucleic 4
    cDNA 3
    Primer pair 1

    Microarray probesets 5
References
more
  • Summaries
    All 11
    Developmental Gene Expression 1
  • Earliest
    J:36776 Sakazume S, et al., [Analysis of a novel gene expressed in apoptotic T-cell hybridoma treated with dexamethasone]. Hokkaido Igaku Zasshi. 1996 Jan;71(1):33-44
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory