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Mkrn1-ps1 Pseudogene Detail
Summary
  • Symbol
    Mkrn1-ps1
  • Name
    makorin, ring finger protein 1, pseudogene 1
  • Feature Type
    pseudogene
  • IDs
    MGI:2663191
    NCBI Gene: 353327
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:88985869-88987258 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 44.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    133 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2663191
 pseudogene Chr5:88985658-88987258 (-)
129S1/SvImJ MGP_129S1SvImJ_G0013173
 pseudogene Chr5:89852918-89854307 (-)
A/J MGP_AJ_G0013157
 pseudogene Chr5:86309442-86310831 (-)
AKR/J MGP_AKRJ_G0013123
 pseudogene Chr5:89146443-89147832 (-)
BALB/cJ MGP_BALBcJ_G0013138
 pseudogene Chr5:87212610-87213999 (-)
C3H/HeJ MGP_C3HHeJ_G0012983
 pseudogene Chr5:89494201-89495590 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013498
 pseudogene Chr5:93503428-93504817 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011669
 pseudogene Chr5:82114792-82116191 (-)
CAST/EiJ MGP_CASTEiJ_G0012716
 pseudogene Chr5:88921322-88922716 (-)
CBA/J MGP_CBAJ_G0012955
 pseudogene Chr5:96624968-96626357 (-)
DBA/2J MGP_DBA2J_G0013035
 pseudogene Chr5:86376423-86377812 (-)
FVB/NJ MGP_FVBNJ_G0013038
 pseudogene Chr5:85287879-85289268 (-)
LP/J MGP_LPJ_G0013108
 pseudogene Chr5:90250238-90251627 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0013056
 pseudogene Chr5:101654335-101655724 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013501
 pseudogene Chr5:88664971-88666360 (-)
PWK/PhJ MGP_PWKPhJ_G0012537
 pseudogene Chr5:85457275-85458669 (-)
SPRET/EiJ MGP_SPRETEiJ_G0012334
 pseudogene Chr5:88101361-88102752 (-)
WSB/EiJ MGP_WSBEiJ_G0012753
 pseudogene Chr5:89053088-89054477 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    4 involving Mkrn1-ps1
  • Find Mice (IMSR)
    1 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000082389 Ensembl Gene Model | MGI Sequence Detail 1390 C57BL/6J ±  kb
transcript ENSMUST00000122035 Ensembl | MGI Sequence Detail 1390 Not Applicable  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 13
    Phenotypes 6
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:346835 Kaneko S, et al., Origin and evolution of processed pseudogenes that stabilize functional Makorin1 mRNAs in mice, primates and other mammals. Genetics. 2006 Apr;172(4):2421-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory