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Slc36a3 Gene Detail
Summary
  • Symbol
    Slc36a3
  • Name
    solute carrier family 36 (proton/amino acid symporter), member 3
  • Synonyms
    PAT3, TRAMD2, tramdorin2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2665001
    NCBI Gene: 215332
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:55015641-55042534 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 32.13 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    816 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2665001
 protein coding gene Chr11:55015641-55042548 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018326
 protein coding gene Chr11:54638755-54665692 (-)
A/J MGP_AJ_G0018295
 protein coding gene Chr11:52599023-52626036 (-)
AKR/J MGP_AKRJ_G0018264
 protein coding gene Chr11:54318811-54345506 (-)
BALB/cJ MGP_BALBcJ_G0018266
 protein coding gene Chr11:52938769-52965823 (-)
C3H/HeJ MGP_C3HHeJ_G0018077
 protein coding gene Chr11:54258887-54285378 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018718
 protein coding gene Chr11:56292885-56323317 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016368
 protein coding gene Chr11:50034788-50061228 (-)
CAST/EiJ MGP_CASTEiJ_G0017642
 protein coding gene Chr11:54302264-54330644 (-)
CBA/J MGP_CBAJ_G0018052
 protein coding gene Chr11:58979651-59009115 (-)
DBA/2J MGP_DBA2J_G0018161
 protein coding gene Chr11:52296716-52323863 (-)
FVB/NJ MGP_FVBNJ_G0018153
 protein coding gene Chr11:51959252-51986208 (-)
LP/J MGP_LPJ_G0018236
 protein coding gene Chr11:55091370-55118454 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018179
 protein coding gene Chr11:60177058-60206155 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018760
 protein coding gene Chr11:54337699-54366944 (-)
PWK/PhJ MGP_PWKPhJ_G0017415
 protein coding gene Chr11:52861083-52888455 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017210
 protein coding gene Chr11:54139033-54166807 (-)
WSB/EiJ MGP_WSBEiJ_G0017690
 protein coding gene Chr11:53977714-54004472 (-)



Homology
more
  • Human Ortholog
    SLC36A3, solute carrier family 36 member 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLC36A3, solute carrier family 36 member 3
  • Synonyms
    PAT3, TRAMD2, tramdorin2
  • Links
    NCBI Gene ID: 285641
    neXtProt AC: NX_Q495N2
    UniProt: Q495N2

  • Chr Location
    5q33.1; chr5:151276358-151303766 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    13 phenotype references
Male mice homozygous for a null allele exhibit normal fecundity.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    800
  • Tissues
    94
  • cDNA Data
    4
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049491 Ensembl Gene Model | MGI Sequence Detail 26894 C57BL/6J ±  kb
transcript ENSMUST00000020502 Ensembl | MGI Sequence Detail 1768 Not Applicable  
polypeptide ENSMUSP00000020502 Ensembl | MGI Sequence Detail 477 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 3
References
more
  • Summaries
    All 37
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 2
    Phenotypes 13
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:279039 Lu Y, et al., CRISPR/Cas9-mediated genome editing reveals 30 testis-enriched genes dispensable for male fertility in mice. Biol Reprod. 2019 Aug 1;101(2):501-511
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory