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BC025920 Gene Detail
Summary
  • Symbol
    BC025920
  • Name
    cDNA sequence BC025920
Location &
Maps
more
  • Sequence Map
    Chr10:81442142-81445670 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 39.72 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    171 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2670983
 protein coding gene Chr10:81442104-81456537 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017568
 protein coding gene Chr10:82342544-82358470 (+)
A/J MGP_AJ_G0017546
 protein coding gene Chr10:79413361-79427523 (+)
AKR/J MGP_AKRJ_G0017507
 protein coding gene Chr10:81588802-81606014 (+)
BALB/cJ MGP_BALBcJ_G0017508
 protein coding gene Chr10:79638375-79656010 (+)
C3H/HeJ MGP_C3HHeJ_G0017331
 protein coding gene Chr10:81698071-81714081 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017962
 protein coding gene Chr10:85162584-85176546 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015651
 protein coding gene Chr10:75609659-75623075 (+)
CAST/EiJ MGP_CASTEiJ_G0016898
 protein coding gene Chr10:81942456-81964752 (+)
CBA/J MGP_CBAJ_G0017303
 protein coding gene Chr10:88506821-88527617 (+)
DBA/2J MGP_DBA2J_G0017409
 protein coding gene Chr10:78617753-78631700 (+)
FVB/NJ MGP_FVBNJ_G0017403
 protein coding gene Chr10:77887376-77902540 (+)
LP/J MGP_LPJ_G0017480
 protein coding gene Chr10:82796674-82810790 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017429
 protein coding gene Chr10:90325601-90343384 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018003
 protein coding gene Chr10:81609397-81624535 (+)
PWK/PhJ MGP_PWKPhJ_G0016679
 protein coding gene Chr10:78524604-78542958 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016469
 protein coding gene Chr10:80556401-80573583 (+)
WSB/EiJ MGP_WSBEiJ_G0016958
 protein coding gene Chr10:81657219-81674187 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from multigenic genotypes
    16 phenotype references
  • All Mutations and Alleles
    12
  • Chemically induced (other)
    1
  • Gene trapped
    8
  • Targeted
    2
  • Transgenic
    1
  • Genomic Mutations
    1 involving BC025920
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    25 strains or lines available
Gene Ontology
(GO)
Classifications
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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    38
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 268319 NCBI Gene Model | MGI Sequence Detail 3529 C57BL/6J ±  kb
transcript NR_030677 RefSeq | MGI Sequence Detail 1906 C57BL/6  
polypeptide Q3US60 UniProt | EBI | MGI Sequence Detail 128 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR050752 C2H2-type zinc-finger domain-containing protein
    IPR036236 Zinc finger C2H2 superfamily
    IPR013087 Zinc finger C2H2-type
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 28
    Phenotypes 16
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:343425 Andreani C, et al., SIRT6 promotes metastasis and relapse in HER2-positive breast cancer. Sci Rep. 2023 Dec 12;13(1):22000
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory