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Vaultrc5 Gene Detail
Summary
  • Symbol
    Vaultrc5
  • Name
    vault RNA component 5
  • Synonyms
    Gm22653, Mvg1
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2673990
    NCBI Gene: 378472
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:36934919-36935061 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 19.46 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    131 from dbSNP Build 142
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2673990
 lncRNA gene Chr18:36934816-36935160 (+)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
  • Other Mouse Links
    GEO
Sequences &
Gene Models
less
  • All Sequences
    6
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00002074846 Ensembl Gene Model | MGI Sequence Detail 143 C57BL/6J ±  kb
transcript ENSMUST00020181660 Ensembl | MGI Sequence Detail 143 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:5452430
References
more
  • Summaries
    All 9
    Phenotypes 1
  • Earliest
    J:83675 Kickhoefer VA, et al., Identification of conserved vault RNA expression elements and a non-expressed mouse vault RNA gene. Gene. 2003 May 8;309(2):65-70
  • Latest
    J:359009 Prajapat M, et al., The small noncoding RNA Vaultrc5 is dispensable to mouse development. RNA. 2024 Oct 16;30(11):1465-1476
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory