Mirlet7f-1 Gene Detail

Summary

• Symbol
  Mirlet7f-1
• Name
  microRNA let7f-1
• Synonyms
  Mirnlet7f1, mmu-let-7f-1

• Feature Type
  miRNA gene
• IDs
  MGI:2676798
  NCBI Gene: 387252
• Member of
  Mirc8 cluster
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr13:48691305-48691393 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 24.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  55 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2676798	miRNA gene	Chr13:48691305-48691393 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0008064	miRNA gene	Chr13:47431883-47431971 (-)
A/J	MGP_AJ_G0008054	miRNA gene	Chr13:45781370-45781458 (-)
AKR/J	MGP_AKRJ_G0008030	miRNA gene	Chr13:47063910-47063998 (-)
BALB/cJ	MGP_BALBcJ_G0008035	miRNA gene	Chr13:45993666-45993754 (-)
C3H/HeJ	MGP_C3HHeJ_G0007978	miRNA gene	Chr13:46894006-46894094 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0008217	miRNA gene	Chr13:48876455-48876543 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0007329	miRNA gene	Chr13:43781544-43781632 (-)
CAST/EiJ	MGP_CASTEiJ_G0007862	miRNA gene	Chr13:46876193-46876281 (-)
CBA/J	MGP_CBAJ_G0007948	miRNA gene	Chr13:50909890-50909978 (-)
DBA/2J	MGP_DBA2J_G0007982	miRNA gene	Chr13:45308838-45308926 (-)
FVB/NJ	MGP_FVBNJ_G0008004	miRNA gene	Chr13:44819240-44819328 (-)
LP/J	MGP_LPJ_G0008064	miRNA gene	Chr13:47674234-47674322 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007975	miRNA gene	Chr13:50671392-50671480 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0008219	miRNA gene	Chr13:46745030-46745118 (-)
PWK/PhJ	MGP_PWKPhJ_G0007782	miRNA gene	Chr13:45466157-45466245 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0007679	miRNA gene	Chr13:45463342-45463430 (-)
WSB/EiJ	MGP_WSBEiJ_G0007934	miRNA gene	Chr13:47076121-47076209 (-)

Homology

• Human Ortholog
  MIRLET7F1, microRNA let-7f-1

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  MIRLET7F1, microRNA let-7f-1
  
• Synonyms
  let-7f-1, LET7F1, MIRNLET7F1
• Links
  HGNC:31483

  NCBI Gene ID: 406888

  
  
• Chr Location
  chr9:94176347-94176433 (+)  GRCh38

---

• MGI Vertebrate Homology
  Mirlet7f-1 stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: MIRLET7F1
• Gene Tree
  Mirlet7f-1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Mirlet7f-1
• Find Mice (IMSR)
  3 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  5
• GO References
  5

Expression

• Assay Results
  715
• Tissues
  7
• Literature Summary
  14

Images

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000105621 (Evidence)
• NCBI Gene
  387252

Representative Sequences			Length	Strain/Species
genomic	387252	NCBI Gene Model | MGI Sequence Detail	89	C57BL/6J
transcript	NR_029731	RefSeq | MGI Sequence Detail	89	ZRU/MplStud

Molecular
Reagents

• All nucleic 4

  Primer pair 2

  Other 2

Other Database
Links

miRBase

MI0000562

References

• Summaries
  All 31

  Developmental Gene Expression 14

  Gene Ontology 5

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:344338 Subramanian M, et al., Growth-suppressor microRNAs mediate synaptic overgrowth and behavioral deficits in Fragile X mental retardation protein deficiency. iScience. 2024 Jan 19;27(1):108676

TSS for Mirlet7f-1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr122387	Chr13:48691303-48691310 (-)	86 bp