Mir128-1 MGI Mouse Gene Detail - MGI:2676813

Symbol

Mir128-1
Name

microRNA 128-1
Synonyms

Mirn128, Mirn128-1, Mirn128a, mmu-mir-128-1, mmu-mir-128a

Feature Type

miRNA gene
IDs

MGI:2676813
NCBI Gene: 387147
Alliance

gene page
Transcription Start Sites

1 TSS

Sequence Map

Chr1:128130098-128130167 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 1, 55.80 cM
Mapping Data

1 experiment

SNPs within 2kb

64 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2676813	miRNA gene	Chr1:128130098-128130167 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0007656	miRNA gene	Chr1:131429299-131429368 (+)
A/J	MGP_AJ_G0007651	miRNA gene	Chr1:126531248-126531317 (+)
AKR/J	MGP_AKRJ_G0007625	miRNA gene	Chr1:130278427-130278496 (+)
BALB/cJ	MGP_BALBcJ_G0007629	miRNA gene	Chr1:126908912-126908981 (+)
C3H/HeJ	MGP_C3HHeJ_G0007574	miRNA gene	Chr1:130441693-130441762 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0007804	miRNA gene	Chr1:136374626-136374695 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006968	miRNA gene	Chr1:119893955-119894024 (+)
CAST/EiJ	MGP_CASTEiJ_G0007471	miRNA gene	Chr1:129414633-129414702 (+)
CBA/J	MGP_CBAJ_G0007549	miRNA gene	Chr1:140966047-140966116 (+)
DBA/2J	MGP_DBA2J_G0007583	miRNA gene	Chr1:125571999-125572068 (+)
FVB/NJ	MGP_FVBNJ_G0007597	miRNA gene	Chr1:124283505-124283574 (+)
LP/J	MGP_LPJ_G0007662	miRNA gene	Chr1:132781880-132781949 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0007571	miRNA gene	Chr1:146821476-146821545 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0007804	miRNA gene	Chr1:130050433-130050502 (+)
PWK/PhJ	MGP_PWKPhJ_G0007403	miRNA gene	Chr1:124543482-124543551 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0007305	miRNA gene	Chr1:129011707-129011776 (+)
WSB/EiJ	MGP_WSBEiJ_G0007538	miRNA gene	Chr1:129999614-129999683 (+)

Human Ortholog

MIR128-1, microRNA 128-1

Vertebrate Orthologs

1

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

MIR128-1, microRNA 128-1
Synonyms

mir-128-1, MIR128A, MIRN128-1, MIRN128A
Links

HGNC:31510

NCBI Gene ID: 406915
Chr Location

chr2:135665397-135665478 (+) GRCh38

MGI Vertebrate Homology

Mir128-1 stringent orthology
1 human;1 mouse
HCOP

vertebrate homology predictions: MIR128-1
Gene Tree

Mir128-1

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Phenotype Summary

1 phenotype from 1 allele in 1 genetic background
8 phenotype references

All Mutations and Alleles

6
Chemically induced (other)

2
Radiation induced

1
Targeted

3
Genomic Mutations

3 involving Mir128-1
Find Mice (IMSR)

1 strains or lines available

Mice homozygous for a knock-out allele are viable and behaviorally normal.

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All GO Annotations

3
GO References

3

Molecular Function

carbohydrate derivative binding	cytoskeletal protein binding	DNA binding	enzyme regulator	hydrolase	ligase	lipid binding	oxidoreductase	RNA binding	signaling receptor activity	signaling receptor binding	transcription	transferase	transporter

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

762
Tissues

32
Literature Summary

15

Images

Tissue x Stage Matrix

Other Mouse Links

GEO

Expression Atlas

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All Sequences

24
RefSeq

1

Ensembl

ENSMUSG00000065520 (Evidence)
NCBI Gene

387147

Representative Sequences				Length	Strain/Species	Flank
	genomic	387147	NCBI Gene Model \| MGI Sequence Detail	70	C57BL/6J	± kb
	transcript	NR_029543	RefSeq \| MGI Sequence Detail	70	C57BL/6

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All nucleic 8

Primer pair 3

Other 5

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miRBase

MI0000155

Summaries

All 41

Developmental Gene Expression 15

Gene Ontology 3

Phenotypes 8
Earliest

J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
Latest

J:357554 Todorov H, et al., Stage-specific expression patterns and co-targeting relationships among miRNAs in the developing mouse cerebral cortex. Commun Biol. 2024 Oct 22;7(1):1366

TSS for Mir128-1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr8522	Chr1:128130159-128130166 (+)	65 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 12/10/2024 MGI 6.24