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Mir20a Gene Detail
Summary
  • Symbol
    Mir20a
  • Name
    microRNA 20a
  • Synonyms
    Mir-20, Mirn20, Mirn20a, mmu-mir-20a
  • Feature Type
    miRNA gene
  • IDs
    MGI:2676872
    NCBI Gene: 387139
  • Member of
    Mirc1 cluster
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr14:115281589-115281695 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 59.40 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    87 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2676872
 miRNA gene Chr14:115281589-115281695 (+)
129S1/SvImJ MGP_129S1SvImJ_G0008154
 miRNA gene Chr14:112498464-112498570 (+)
A/J MGP_AJ_G0008142
 miRNA gene Chr14:108247021-108247127 (+)
AKR/J MGP_AKRJ_G0008121
 miRNA gene Chr14:111782151-111782257 (+)
BALB/cJ MGP_BALBcJ_G0008125
 miRNA gene Chr14:108763981-108764087 (+)
C3H/HeJ MGP_C3HHeJ_G0008068
 miRNA gene Chr14:111608342-111608448 (+)
C57BL/6NJ MGP_C57BL6NJ_G0008316
 miRNA gene Chr14:116827944-116828050 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0007399
 miRNA gene Chr14:104418369-104418475 (+)
CAST/EiJ MGP_CASTEiJ_G0007943
 miRNA gene Chr14:109386148-109386254 (+)
CBA/J MGP_CBAJ_G0008036
 miRNA gene Chr14:121367180-121367286 (+)
DBA/2J MGP_DBA2J_G0008072
 miRNA gene Chr14:108168624-108168730 (+)
FVB/NJ MGP_FVBNJ_G0008096
 miRNA gene Chr14:106513883-106513989 (+)
LP/J MGP_LPJ_G0008152
 miRNA gene Chr14:113525889-113525995 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0008063
 miRNA gene Chr14:126244939-126245045 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0008311
 miRNA gene Chr14:111208068-111208174 (+)
PWK/PhJ MGP_PWKPhJ_G0007865
 miRNA gene Chr14:105114606-105114712 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007760
 miRNA gene Chr14:107345657-107345761 (+)
WSB/EiJ MGP_WSBEiJ_G0008021
 miRNA gene Chr14:111952392-111952498 (+)



Homology
more
  • Human Ortholog
    MIR20A, microRNA 20a
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR20A, microRNA 20a
  • Synonyms
    C13orf25, hsa-mir-20, hsa-mir-20a, MIR17HG, miR-20, MIR20, mir-20a, MIRH1, MIRHG1, MIRN20, MIRN20A, miRNA20A
  • Links
    NCBI Gene ID: 406982

  • Chr Location
    chr13:91351065-91351135 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Mir20a
  • Find Mice (IMSR)
    2 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    57
  • GO References
    11
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    811
  • Tissues
    77
  • Literature Summary
    30
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 387139 NCBI Gene Model | MGI Sequence Detail 107 C57BL/6J ±  kb
transcript NR_029737 RefSeq | MGI Sequence Detail 107 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 13
    Primer pair 7
    Other 6
Other Database
Links
less
miRBase MI0000568
References
more
  • Summaries
    All 65
    Developmental Gene Expression 30
    Gene Ontology 11
    Phenotypes 8
  • Earliest
    J:67314 Roix J, et al., Molecular and functional mapping of the piebald deletion complex on mouse chromosome 14. Genetics. 2001 Feb;157(2):803-15
  • Latest
    J:287165 Wang J, et al., XPO5 promotes primary miRNA processing independently of RanGTP. Nat Commun. 2020 Apr 15;11(1):1845
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory