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Rdh19 Gene Detail
Summary
  • Symbol
    Rdh19
  • Name
    retinol dehydrogenase 19
  • Synonyms
    Rdhs, RDH-S
  • Feature Type
    protein coding gene
  • IDs
    MGI:2678390
    NCBI Gene: 216453
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:127685797-127697045 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 76.27 cM, cytoband D3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    391 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2678390
 protein coding gene Chr10:127685797-127697045 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017839
 protein coding gene Chr10:131429331-131448984 (+)
A/J MGP_AJ_G0017814
 protein coding gene Chr10:126247638-126261524 (+)
AKR/J MGP_AKRJ_G0017777
 protein coding gene Chr10:129958909-129971663 (+)
BALB/cJ MGP_BALBcJ_G0017778
 protein coding gene Chr10:126631234-126644701 (+)
C3H/HeJ MGP_C3HHeJ_G0017602
 protein coding gene Chr10:130100319-130111775 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018233
 protein coding gene Chr10:135948073-135963579 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015912
 protein coding gene Chr10:120203687-120216152 (+)
CAST/EiJ MGP_CASTEiJ_G0017162
 protein coding gene Chr10:130804179-130807821 (+)
CBA/J MGP_CBAJ_G0017571
 protein coding gene Chr10:141476718-141493384 (+)
DBA/2J MGP_DBA2J_G0017677
 protein coding gene Chr10:125322541-125335834 (+)
FVB/NJ MGP_FVBNJ_G0017672
 protein coding gene Chr10:124253710-124271429 (+)
LP/J MGP_LPJ_G0017751
 protein coding gene Chr10:132116235-132126645 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017700
 protein coding gene Chr10:144100299-144114865 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018273
 protein coding gene Chr10:130046082-130059144 (+)
PWK/PhJ MGP_PWKPhJ_G0016947
 protein coding gene Chr10:125534663-125560085 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016737
 protein coding gene Chr10:129063492-129087083 (+)
WSB/EiJ MGP_WSBEiJ_G0017221
 protein coding gene Chr10:130271371-130285215 (+)



Homology
more
  • Human Ortholog
    RDH16, retinol dehydrogenase 16
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RDH16, retinol dehydrogenase 16
  • Synonyms
    hRDH-E, RODH-4, RODH4, SDR9C8
  • Links
    NCBI Gene ID: 8608
    neXtProt AC: NX_O75452
    UniProt: O75452

  • Chr Location
    12q13.3; chr12:56951431-56959374 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    714
  • Tissues
    8
  • cDNA Data
    4
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 216453 NCBI Gene Model | MGI Sequence Detail 11249 C57BL/6J ±  kb
transcript NM_147222 RefSeq | MGI Sequence Detail 1889 Not Specified  
polypeptide NP_671755 RefSeq | MGI Sequence Detail 318 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR036291 NAD(P)-binding domain superfamily
    IPR020904 Short-chain dehydrogenase/reductase, conserved site
    IPR002347 Short-chain dehydrogenase/reductase SDR
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 2
  • Earliest
    J:85943 Song MS, et al., Identification of a mouse short-chain dehydrogenase/reductase gene, retinol dehydrogenase-similar. Function of non-catalytic amino acid residues in enzyme activity. J Biol Chem. 2003 Oct 10;278(41):40079-87
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory