About   Help   FAQ
Gm5 Gene Detail
Summary
  • Symbol
    Gm5
  • Name
    predicted gene 5
  • Synonyms
    LOC194292, LOC386475
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2684851
    NCBI Gene: 194292
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:150423212-150425684 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 89.50 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    162 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2684851
 lncRNA gene Chr5:150423212-150425769 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006882
 lincRNA gene Chr5:156438747-156441293 (-)
A/J MGP_AJ_G0006876
 lincRNA gene Chr5:149733171-149735724 (-)
AKR/J MGP_AKRJ_G0006846
 lincRNA gene Chr5:154355703-154358257 (-)
BALB/cJ MGP_BALBcJ_G0006852
 lincRNA gene Chr5:150993182-150995732 (-)
C3H/HeJ MGP_C3HHeJ_G0006797
 lincRNA gene Chr5:155355117-155357661 (-)
C57BL/6NJ MGP_C57BL6NJ_G0007017
 lincRNA gene Chr5:162141462-162144013 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006267
 lincRNA gene Chr5:144065330-144067887 (-)
CAST/EiJ MGP_CASTEiJ_G0006716
 lincRNA gene Chr5:155005833-155008382 (-)
CBA/J MGP_CBAJ_G0006779
 lincRNA gene Chr5:168981278-168983840 (-)
DBA/2J MGP_DBA2J_G0006799
 lincRNA gene Chr5:149384243-149386805 (-)
FVB/NJ MGP_FVBNJ_G0006822
 lincRNA gene Chr5:148631014-148633565 (-)
LP/J MGP_LPJ_G0006882
 lincRNA gene Chr5:157096245-157098807 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006804
 lincRNA gene Chr5:171028903-171031451 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007019
 lincRNA gene Chr5:154312197-154314758 (-)
PWK/PhJ MGP_PWKPhJ_G0006657
 lincRNA gene Chr5:148549823-148552448 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006565
 lincRNA gene Chr5:151600869-151603397 (-)
WSB/EiJ MGP_WSBEiJ_G0006770
 lincRNA gene Chr5:155124340-155126902 (-)



Homology
less
  • Gene Tree
    Gm5
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 194292 NCBI Gene Model | MGI Sequence Detail 2473 C57BL/6J ±  kb
transcript NR_024513 RefSeq | MGI Sequence Detail 470 (C57BL/6J x DBA/2J)F1  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 7
    Genomic 2
    cDNA 5
Other
Accession IDs
less
MGI:2686658
References
more
  • Summaries
    All 13
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory