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Fhdc1 Gene Detail
Summary
  • Symbol
    Fhdc1
  • Name
    FH2 domain containing 1
  • Synonyms
    6330505N24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2684972
    NCBI Gene: 229474
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:84349505-84387736 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 37.67 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1087 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2684972
 protein coding gene Chr3:84349503-84387746 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027342
 protein coding gene Chr3:84353756-84391688 (-)
A/J MGP_AJ_G0027306
 protein coding gene Chr3:81550241-81588141 (-)
AKR/J MGP_AKRJ_G0027272
 protein coding gene Chr3:83475441-83513278 (-)
BALB/cJ MGP_BALBcJ_G0027315
 protein coding gene Chr3:81622188-81660452 (-)
C3H/HeJ MGP_C3HHeJ_G0027059
 protein coding gene Chr3:83790620-83828532 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027761
 protein coding gene Chr3:87509881-87549162 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025114
 protein coding gene Chr3:77225543-77264170 (-)
CAST/EiJ MGP_CASTEiJ_G0026506
 protein coding gene Chr3:83969804-84008480 (-)
CBA/J MGP_CBAJ_G0027034
 protein coding gene Chr3:90441067-90478986 (-)
DBA/2J MGP_DBA2J_G0027170
 protein coding gene Chr3:81066827-81105891 (-)
FVB/NJ MGP_FVBNJ_G0027138
 protein coding gene Chr3:79351734-79389990 (-)
LP/J MGP_LPJ_G0027278
 protein coding gene Chr3:85333459-85373867 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027157
 protein coding gene Chr3:96791271-96829030 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027819
 protein coding gene Chr3:83272181-83310839 (-)
PWK/PhJ MGP_PWKPhJ_G0026240
 protein coding gene Chr3:80845508-80883948 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026056
 protein coding gene Chr3:82452647-82490492 (-)
WSB/EiJ MGP_WSBEiJ_G0026584
 protein coding gene Chr3:83636452-83675339 (-)



Homology
more
  • Human Ortholog
    FHDC1, FH2 domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FHDC1, FH2 domain containing 1
  • Synonyms
    INF1
  • Links
    NCBI Gene ID: 85462
    neXtProt AC: NX_Q9C0D6
    UniProt: Q9C0D6

  • Chr Location
    4q31.3; chr4:152911339-152979671 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    757
  • Tissues
    15
  • cDNA Data
    55
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000041842 Ensembl Gene Model | MGI Sequence Detail 38232 C57BL/6J ±  kb
transcript ENSMUST00000091002 Ensembl | MGI Sequence Detail 4162 Not Applicable  
polypeptide ENSMUSP00000088525 Ensembl | MGI Sequence Detail 1149 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 57
    cDNA 55
    Primer pair 2

    Microarray probesets 3
References
more
  • Summaries
    All 34
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 6
    Phenotypes 9
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory