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Samd15 Gene Detail
Summary
  • Symbol
    Samd15
  • Name
    sterile alpha motif domain containing 15
  • Synonyms
    Gm263, LOC238333
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685109
    NCBI Gene: 238333
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:87247240-87260315 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 41.40 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    358 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685109
 protein coding gene Chr12:87246497-87260315 (+)
129S1/SvImJ MGP_129S1SvImJ_G0019981
 protein coding gene Chr12:88096247-88111399 (+)
A/J MGP_AJ_G0019939
 protein coding gene Chr12:84750042-84763796 (+)
AKR/J MGP_AKRJ_G0019914
 protein coding gene Chr12:87048992-87062715 (+)
BALB/cJ MGP_BALBcJ_G0019918
 protein coding gene Chr12:85083038-85097101 (+)
C3H/HeJ MGP_C3HHeJ_G0019724
 protein coding gene Chr12:87537572-87557623 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020370
 protein coding gene Chr12:90629797-90648816 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0017988
 protein coding gene Chr12:81628178-81640246 (+)
CAST/EiJ MGP_CASTEiJ_G0019274
 protein coding gene Chr12:82563253-82576881 (+)
CBA/J MGP_CBAJ_G0019696
 protein coding gene Chr12:94112326-94127145 (+)
DBA/2J MGP_DBA2J_G0019809
 protein coding gene Chr12:84244861-84258833 (+)
FVB/NJ MGP_FVBNJ_G0019796
 protein coding gene Chr12:83238081-83252573 (+)
LP/J MGP_LPJ_G0019883
 protein coding gene Chr12:87977478-87991961 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0019835
 protein coding gene Chr12:96872919-96887424 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020402
 protein coding gene Chr12:86678758-86694987 (+)
PWK/PhJ MGP_PWKPhJ_G0019038
 protein coding gene Chr12:78797285-78811512 (+)
SPRET/EiJ MGP_SPRETEiJ_G0018833
 protein coding gene Chr12:81181372-81198752 (+)
WSB/EiJ MGP_WSBEiJ_G0019327
 protein coding gene Chr12:87454422-87469094 (+)



Homology
more
  • Human Ortholog
    SAMD15, sterile alpha motif domain containing 15
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SAMD15, sterile alpha motif domain containing 15
  • Synonyms
    C14orf174, FAM15A
  • Links
    NCBI Gene ID: 161394
    neXtProt AC: NX_Q9P1V8
    UniProt: Q9P1V8

  • Chr Location
    14q24.3; chr14:77376689-77392163 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 238333 NCBI Gene Model | MGI Sequence Detail 13076 C57BL/6J ±  kb
transcript NM_001290288 RefSeq | MGI Sequence Detail 2063 C57BL/6  
polypeptide F6XZJ7 UniProt | EBI | MGI Sequence Detail 620 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory