About   Help   FAQ
Cdhr18 Gene Detail
Summary
  • Symbol
    Cdhr18
  • Name
    cadherin related family member 18
  • Synonyms
    Gm281, LOC238939
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685127
    NCBI Gene: 238939
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:8555242-8646046 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 7.07 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2977 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685127
 protein coding gene Chr14:8555242-8655145 (+)
129S1/SvImJ MGP_129S1SvImJ_G0021003
 protein coding gene Chr14:6324657-6430072 (-)
A/J MGP_AJ_G0020951
 protein coding gene Chr14:6176333-6283987 (-)
AKR/J MGP_AKRJ_G0020928
 protein coding gene Chr14:6267090-6377361 (-)
BALB/cJ MGP_BALBcJ_G0020954
 protein coding gene Chr14:6183482-6290282 (-)
C3H/HeJ MGP_C3HHeJ_G0020738
 protein coding gene Chr14:6374992-6483950 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021387
 protein coding gene Chr14:6507252-6611038 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018956
 protein coding gene Chr14:6831571-6939837 (-)
CAST/EiJ MGP_CASTEiJ_G0020260
 protein coding gene Chr14:6353628-6465541 (-)
CBA/J MGP_CBAJ_G0020704
 protein coding gene Chr14:6729346-6849835 (-)
DBA/2J MGP_DBA2J_G0020827
 protein coding gene Chr14:6102910-6203933 (-)
FVB/NJ MGP_FVBNJ_G0020809
 protein coding gene Chr14:6036577-6136695 (-)
LP/J MGP_LPJ_G0020903
 protein coding gene Chr14:6330745-6447050 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020835
 protein coding gene Chr14:6803634-6908957 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021420
 protein coding gene Chr14:6239249-6336883 (-)
PWK/PhJ MGP_PWKPhJ_G0020012
 protein coding gene Chr14:6098985-6200458 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019832
 protein coding gene Chr14:6321873-6439461 (-)
WSB/EiJ MGP_WSBEiJ_G0020318
 protein coding gene Chr14:6271689-6367084 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    29
  • RefSeq
    5
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 238939 NCBI Gene Model | MGI Sequence Detail 90805 C57BL/6J ±  kb
transcript NM_001393529 RefSeq | MGI Sequence Detail 2518 C57BL/6  
polypeptide NP_001380458 RefSeq | MGI Sequence Detail 818 C57BL/6  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:7382746
References
more
  • Summaries
    All 12
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory