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Ubap1l Gene Detail
Summary
  • Symbol
    Ubap1l
  • Name
    ubiquitin-associated protein 1-like
  • Synonyms
    Gm514, LOC208080
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685360
    NCBI Gene: 208080
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:65268323-65287659 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 35.26 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    693 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685360
 protein coding gene Chr9:65268311-65287659 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034955
 protein coding gene Chr9:65088728-65109571 (+)
A/J MGP_AJ_G0034935
 protein coding gene Chr9:62896807-62916534 (+)
AKR/J MGP_AKRJ_G0034865
 protein coding gene Chr9:64382878-64405173 (+)
BALB/cJ MGP_BALBcJ_G0034928
 protein coding gene Chr9:62620438-62640141 (+)
C3H/HeJ MGP_C3HHeJ_G0034638
 protein coding gene Chr9:64910618-64935171 (+)
C57BL/6NJ MGP_C57BL6NJ_G0035447
 protein coding gene Chr9:66858064-66889426 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032358
 protein coding gene Chr9:62546419-62565429 (+)
CAST/EiJ MGP_CASTEiJ_G0033959
 protein coding gene Chr9:65098051-65121735 (+)
CBA/J MGP_CBAJ_G0034609
 protein coding gene Chr9:69197816-69223937 (+)
DBA/2J MGP_DBA2J_G0034768
 protein coding gene Chr9:62667814-62687459 (+)
FVB/NJ MGP_FVBNJ_G0034710
 protein coding gene Chr9:61990659-62010142 (+)
LP/J MGP_LPJ_G0034851
 protein coding gene Chr9:65361522-65386750 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034752
 protein coding gene Chr9:70427183-70447590 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0035469
 protein coding gene Chr9:64481716-64506222 (+)
PWK/PhJ MGP_PWKPhJ_G0033663
 protein coding gene Chr9:62871293-62890503 (+)
SPRET/EiJ MGP_SPRETEiJ_G0033497
 protein coding gene Chr9:64771427-64790230 (+)
WSB/EiJ MGP_WSBEiJ_G0034072
 protein coding gene Chr9:64382221-64402496 (+)



Homology
more
  • Human Ortholog
    UBAP1L, ubiquitin associated protein 1 like
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    UBAP1L, ubiquitin associated protein 1 like
  • Synonyms
    UBAP-1L
  • Links
    NCBI Gene ID: 390595
    neXtProt AC: NX_F5GYI3
    UniProt: F5GYI3

  • Chr Location
    15q22.31; chr15:65092760-65115200 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Gene trapped
    1
  • Genomic Mutations
    1 involving Ubap1l
  • Find Mice (IMSR)
    17 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086228 Ensembl Gene Model | MGI Sequence Detail 19337 C57BL/6J ±  kb
transcript ENSMUST00000147185 Ensembl | MGI Sequence Detail 1380 Not Applicable  
polypeptide ENSMUSP00000128815 Ensembl | MGI Sequence Detail 384 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR038870 Ubiquitin-associated protein 1
    IPR042575 Ubiquitin-associated protein 1, C-terminal
    IPR049467 Ubiquitin-associated protein 1-like, UBA2 domain
    IPR023340 UMA domain
References
more
  • Summaries
    All 16
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory