Dnmt3bos Gene Detail

Summary

• Symbol
  Dnmt3bos
• Name
  DNA methyltransferase 3B, opposite strand
• Synonyms
  7530422B04Rik, LOC228792

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:2685409
  NCBI Gene: 228792
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:153490610-153492206 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 75.79 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  98 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2685409	antisense lncRNA gene	Chr2:153490610-153492206 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003670	antisense lncRNA gene	Chr2:158319296-158320892 (-)
A/J	MGP_AJ_G0003652	antisense lncRNA gene	Chr2:151968309-151969906 (-)
AKR/J	MGP_AKRJ_G0003630	antisense lncRNA gene	Chr2:156418653-156420249 (-)
BALB/cJ	MGP_BALBcJ_G0003641	antisense lncRNA gene	Chr2:152273598-152275194 (-)
C3H/HeJ	MGP_C3HHeJ_G0003588	antisense lncRNA gene	Chr2:156803378-156804974 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003780	antisense lncRNA gene	Chr2:162908205-162909801 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003286	antisense lncRNA gene	Chr2:145540777-145542359 (-)
CAST/EiJ	MGP_CASTEiJ_G0003551	antisense lncRNA gene	Chr2:157065928-157067524 (-)
CBA/J	MGP_CBAJ_G0003585	antisense lncRNA gene	Chr2:168930075-168931671 (-)
DBA/2J	MGP_DBA2J_G0003592	antisense lncRNA gene	Chr2:151181646-151183242 (-)
FVB/NJ	MGP_FVBNJ_G0003613	antisense lncRNA gene	Chr2:149644453-149646049 (-)
LP/J	MGP_LPJ_G0003670	antisense lncRNA gene	Chr2:158453293-158454889 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003601	antisense lncRNA gene	Chr2:172919391-172920988 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003780	antisense lncRNA gene	Chr2:156324768-156326364 (-)
PWK/PhJ	MGP_PWKPhJ_G0003506	antisense lncRNA gene	Chr2:150716280-150717877 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003449	antisense lncRNA gene	Chr2:155164009-155165605 (-)
WSB/EiJ	MGP_WSBEiJ_G0003585	antisense lncRNA gene	Chr2:157213950-157215546 (-)

Homology

• Gene Tree
  Dnmt3bos
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000079000 (Evidence)
• NCBI Gene
  228792

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000079000	Ensembl Gene Model | MGI Sequence Detail	1597	C57BL/6J
transcript	ENSMUST00000124988	Ensembl | MGI Sequence Detail	718	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 8
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;