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C2cd4d Gene Detail
Summary
  • Symbol
    C2cd4d
  • Name
    C2 calcium-dependent domain containing 4D
  • Synonyms
    Gm659, LOC271944
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685505
    NCBI Gene: 271944
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:94269745-94271873 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.55 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    107 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685505
 protein coding gene Chr3:94269720-94271874 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027546
 protein coding gene Chr3:94932464-94934592 (+)
A/J MGP_AJ_G0027505
 protein coding gene Chr3:92044463-92046591 (+)
AKR/J MGP_AKRJ_G0027473
 protein coding gene Chr3:94133207-94135335 (+)
BALB/cJ MGP_BALBcJ_G0027516
 protein coding gene Chr3:91747506-91749634 (+)
C3H/HeJ MGP_C3HHeJ_G0027252
 protein coding gene Chr3:94424616-94426744 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027965
 protein coding gene Chr3:98526931-98529059 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025307
 protein coding gene Chr3:88534218-88536343 (+)
CAST/EiJ MGP_CASTEiJ_G0026700
 protein coding gene Chr3:93774044-93776172 (+)
CBA/J MGP_CBAJ_G0027228
 protein coding gene Chr3:102017339-102019467 (+)
DBA/2J MGP_DBA2J_G0027367
 protein coding gene Chr3:91305207-91307335 (+)
FVB/NJ MGP_FVBNJ_G0027337
 protein coding gene Chr3:89409911-89412039 (+)
LP/J MGP_LPJ_G0027475
 protein coding gene Chr3:96240716-96242844 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027364
 protein coding gene Chr3:108250229-108252357 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028019
 protein coding gene Chr3:93817512-93819640 (+)
PWK/PhJ MGP_PWKPhJ_G0026428
 protein coding gene Chr3:91196564-91198692 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026249
 protein coding gene Chr3:92158488-92160620 (+)
WSB/EiJ MGP_WSBEiJ_G0026783
 protein coding gene Chr3:94165659-94167787 (+)



Homology
more
  • Human Ortholog
    C2CD4D, C2 calcium dependent domain containing 4D
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    C2CD4D, C2 calcium dependent domain containing 4D
  • Synonyms
    FAM148D
  • Links
    NCBI Gene ID: 100191040
    neXtProt AC: NX_B7Z1M9
    UniProt: B7Z1M9

  • Chr Location
    chr1:151837818-151840557 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving C2cd4d
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    13 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    2
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091648 Ensembl Gene Model | MGI Sequence Detail 2129 C57BL/6J ±  kb
transcript ENSMUST00000169433 Ensembl | MGI Sequence Detail 1321 Not Applicable  
polypeptide ENSMUSP00000128182 Ensembl | MGI Sequence Detail 341 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 1
    Primer pair 1
References
more
  • Summaries
    All 14
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 4
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory