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Zscan30 Gene Detail
Summary
  • Symbol
    Zscan30
  • Name
    zinc finger and SCAN domain containing 30
  • Synonyms
    C230097I24Rik, Zfp397os
Location &
Maps
more
  • Sequence Map
    Chr18:24097875-24104844 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 12.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    185 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685600
 protein coding gene Chr18:24065597-24120362 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024195
 protein coding gene Chr18:21685571-21694058 (-)
A/J MGP_AJ_G0024160
 protein coding gene Chr18:21101846-21112075 (-)
AKR/J MGP_AKRJ_G0024129
 protein coding gene Chr18:21743812-21750740 (-)
BALB/cJ MGP_BALBcJ_G0024160
 protein coding gene Chr18:21148600-21155442 (-)
C3H/HeJ MGP_C3HHeJ_G0023928
 protein coding gene Chr18:21664462-21671162 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024602
 protein coding gene Chr18:22621169-22630075 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022044
 protein coding gene Chr18:20973345-20984254 (-)
CAST/EiJ MGP_CASTEiJ_G0023402
 protein coding gene Chr18:21456966-21457834 (-)
CBA/J MGP_CBAJ_G0023896
 protein coding gene Chr18:23217917-23228904 (-)
DBA/2J MGP_DBA2J_G0024028
 protein coding gene Chr18:20779407-20786937 (-)
FVB/NJ MGP_FVBNJ_G0023994
 protein coding gene Chr18:20527227-20537770 (-)
LP/J MGP_LPJ_G0024109
 protein coding gene Chr18:21859286-21867798 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024022
 protein coding gene Chr18:24247992-24258113 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024650
 protein coding gene Chr18:21500264-21506894 (-)
PWK/PhJ MGP_PWKPhJ_G0023146
 protein coding gene Chr18:20903053-20916841 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022955
 protein coding gene Chr18:21730114-21737029 (-)
WSB/EiJ MGP_WSBEiJ_G0023466
 protein coding gene Chr18:21397288-21403508 (-)



Homology
more
  • Human Ortholog
    ZSCAN30, zinc finger and SCAN domain containing 30
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZSCAN30, zinc finger and SCAN domain containing 30
  • Synonyms
    ZNF397OS, ZNF917, ZNF-WYM
  • Links
    NCBI Gene ID: 100101467
    neXtProt AC: NX_Q86W11
    UniProt: Q86W11

  • Chr Location
    18q12.2; chr18:35251058-35290245 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    730
  • Tissues
    15
  • cDNA Data
    11
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024274 Ensembl Gene Model | MGI Sequence Detail 6970 C57BL/6J ±  kb
transcript ENSMUST00000115829 Ensembl | MGI Sequence Detail 1592 Not Applicable  
polypeptide NP_001357862 RefSeq | MGI Sequence Detail 535 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR003309 SCAN domain
    IPR050916 SCAN domain and C2H2-type zinc finger
    IPR038269 SCAN domain superfamily
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Phenotypes 1
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory