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Acss3 Gene Detail
Summary
  • Symbol
    Acss3
  • Name
    acyl-CoA synthetase short-chain family member 3
  • Synonyms
    8430416H19Rik, LOC380660
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685720
    NCBI Gene: 380660
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:106769378-106959529 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 55.66 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    6283 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685720
 protein coding gene Chr10:106769375-106959622 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017706
 protein coding gene Chr10:109084485-109295628 (-)
A/J MGP_AJ_G0017683
 protein coding gene Chr10:105020618-105213105 (-)
AKR/J MGP_AKRJ_G0017645
 protein coding gene Chr10:108082876-108281600 (-)
BALB/cJ MGP_BALBcJ_G0017647
 protein coding gene Chr10:105403610-105598303 (-)
C3H/HeJ MGP_C3HHeJ_G0017472
 protein coding gene Chr10:108163586-108366858 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018104
 protein coding gene Chr10:112884565-113097029 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015783
 protein coding gene Chr10:99972389-100151982 (-)
CAST/EiJ MGP_CASTEiJ_G0017033
 protein coding gene Chr10:108259767-108459231 (-)
CBA/J MGP_CBAJ_G0017441
 protein coding gene Chr10:117258222-117484818 (-)
DBA/2J MGP_DBA2J_G0017546
 protein coding gene Chr10:104156791-104355474 (-)
FVB/NJ MGP_FVBNJ_G0017540
 protein coding gene Chr10:103175551-103360757 (-)
LP/J MGP_LPJ_G0017620
 protein coding gene Chr10:109715679-109922922 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017570
 protein coding gene Chr10:119739373-120010078 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018142
 protein coding gene Chr10:108052905-108255037 (-)
PWK/PhJ MGP_PWKPhJ_G0016815
 protein coding gene Chr10:104218991-104408752 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016605
 protein coding gene Chr10:106806915-106998489 (-)
WSB/EiJ MGP_WSBEiJ_G0017093
 protein coding gene Chr10:108166857-108376603 (-)



Homology
more
  • Human Ortholog
    ACSS3, acyl-CoA synthetase short chain family member 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ACSS3, acyl-CoA synthetase short chain family member 3
  • Links
    NCBI Gene ID: 79611
    neXtProt AC: NX_Q9H6R3
    UniProt: Q9H6R3

  • Chr Location
    12q21.31; chr12:80936414-81261210 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    828
  • Tissues
    122
  • cDNA Data
    5
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000035948 Ensembl Gene Model | MGI Sequence Detail 190152 C57BL/6J ±  kb
transcript ENSMUST00000165067 Ensembl | MGI Sequence Detail 4696 Not Applicable  
polypeptide ENSMUSP00000128209 Ensembl | MGI Sequence Detail 682 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 5
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 34
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 11
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory