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Platr26 Gene Detail
Summary
  • Symbol
    Platr26
  • Name
    pluripotency associated transcript 26
  • Synonyms
    Gm1631, LOC381371
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2686477
    NCBI Gene: 381371
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:71549761-71561310 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 42.79 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    466 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686477
 lncRNA gene Chr2:71549682-71561320 (+)
129S1/SvImJ MGP_129S1SvImJ_G0005929
 lincRNA gene Chr2:71875641-71889171 (+)
A/J MGP_AJ_G0005922
 lincRNA gene Chr2:69051973-69063454 (+)
AKR/J MGP_AKRJ_G0005897
 lincRNA gene Chr2:70956909-70970157 (+)
BALB/cJ MGP_BALBcJ_G0005900
 lincRNA gene Chr2:69250982-69262686 (+)
C3H/HeJ MGP_C3HHeJ_G0005848
 lincRNA gene Chr2:71166720-71179298 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006061
 lincRNA gene Chr2:74043995-74055398 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005394
 lincRNA gene Chr2:66272681-66284054 (+)
CAST/EiJ MGP_CASTEiJ_G0005784
 lincRNA gene Chr2:71365106-71377679 (+)
CBA/J MGP_CBAJ_G0005833
 lincRNA gene Chr2:76751523-76762966 (+)
DBA/2J MGP_DBA2J_G0005854
 lincRNA gene Chr2:68687602-68699272 (+)
FVB/NJ MGP_FVBNJ_G0005879
 lincRNA gene Chr2:68082111-68093571 (+)
LP/J MGP_LPJ_G0005933
 lincRNA gene Chr2:71762635-71775486 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005867
 lincRNA gene Chr2:78742532-78753927 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006058
 lincRNA gene Chr2:71056344-71067775 (+)
PWK/PhJ MGP_PWKPhJ_G0005733
 lincRNA gene Chr2:68566138-68578604 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005645
 lincRNA gene Chr2:71245080-71256735 (+)
WSB/EiJ MGP_WSBEiJ_G0005837
 lincRNA gene Chr2:71494434-71505847 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    34
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 381371 NCBI Gene Model | MGI Sequence Detail 11550 C57BL/6J ±  kb
transcript NR_037979 RefSeq | MGI Sequence Detail 643 C57BL/6  
polypeptide Q6R5G4 UniProt | EBI | MGI Sequence Detail 120 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
References
more
  • Summaries
    All 18
    Phenotypes 8
  • Earliest
    J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
  • Latest
    J:241492 Bergmann JH, et al., Regulation of the ESC transcriptome by nuclear long noncoding RNAs. Genome Res. 2015 Sep;25(9):1336-46
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/29/2024
MGI 6.24 		The Jackson Laboratory