A030012G06Rik Gene Detail

Summary

• Symbol
  A030012G06Rik
• Name
  RIKEN cDNA A030012G06 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3028038
  NCBI Gene: 402732
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:97171239-97173118 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  171 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3028038	lncRNA gene	Chr9:97171239-97173118 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002351	unclassified gene	Chr9:98554208-98556087 (+)
A/J	MGP_AJ_G0002329	unclassified gene	Chr9:95100162-95102041 (+)
AKR/J	MGP_AKRJ_G0002313	unclassified gene	Chr9:97404139-97406018 (+)
BALB/cJ	MGP_BALBcJ_G0002323	unclassified gene	Chr9:94778817-94780696 (+)
C3H/HeJ	MGP_C3HHeJ_G0002300	unclassified gene	Chr9:97812697-97814576 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002449	unclassified gene	Chr9:101359905-101361784 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002049	unclassified gene	Chr9:92900438-92903154 (+)
CAST/EiJ	MGP_CASTEiJ_G0002262	unclassified gene	Chr9:97613510-97615389 (+)
CBA/J	MGP_CBAJ_G0002294	unclassified gene	Chr9:104889533-104891412 (+)
DBA/2J	MGP_DBA2J_G0002298	unclassified gene	Chr9:94605603-94607482 (+)
FVB/NJ	MGP_FVBNJ_G0002305	unclassified gene	Chr9:93452127-93454006 (+)
LP/J	MGP_LPJ_G0002351	unclassified gene	Chr9:98816532-98818411 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002280	unclassified gene	Chr9:106856919-106858798 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002437	unclassified gene	Chr9:97656938-97659983 (+)
PWK/PhJ	MGP_PWKPhJ_G0002222	unclassified gene	Chr9:94805024-94807732 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0002291	unclassified gene	Chr9:97514250-97516129 (+)

Homology

• Gene Tree
  A030012G06Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000104167 (Evidence)
• NCBI Gene
  402732

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104167	Ensembl Gene Model | MGI Sequence Detail	1880	C57BL/6J
transcript	AK037236	GenBank | ENA | DDBJ | MGI Sequence Detail	1880	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 9
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;