D030025E07Rik Gene Detail

Summary

• Symbol
  D030025E07Rik
• Name
  RIKEN cDNA D030025E07 gene
• Synonyms
  Playrr, Plyrr

• Feature Type
  lncRNA gene
• IDs
  MGI:3028083
  NCBI Gene: 402774
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:127910664-128025254 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  3271 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3028083	lncRNA gene	Chr3:127910664-128025255 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015525	unclassified non-coding RNA gene	Chr3:130666408-130784323 (-)
A/J	MGP_AJ_G0015502	unclassified non-coding RNA gene	Chr3:126171244-126286794 (-)
AKR/J	MGP_AKRJ_G0015466	unclassified non-coding RNA gene	Chr3:129433331-129546639 (-)
BALB/cJ	MGP_BALBcJ_G0015464	unclassified non-coding RNA gene	Chr3:126033878-126145147 (-)
C3H/HeJ	MGP_C3HHeJ_G0015287	unclassified non-coding RNA gene	Chr3:129824811-129936889 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015918	unclassified non-coding RNA gene	Chr3:135361936-135478103 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013653	unclassified non-coding RNA gene	Chr3:121401620-121513986 (-)
CAST/EiJ	MGP_CASTEiJ_G0014841	unclassified non-coding RNA gene	Chr3:129396000-129510800 (-)
CBA/J	MGP_CBAJ_G0015268	unclassified non-coding RNA gene	Chr3:139940649-140052365 (-)
DBA/2J	MGP_DBA2J_G0015362	unclassified non-coding RNA gene	Chr3:125383987-125494069 (-)
FVB/NJ	MGP_FVBNJ_G0015369	unclassified non-coding RNA gene	Chr3:122966859-123072778 (-)
LP/J	MGP_LPJ_G0015441	unclassified non-coding RNA gene	Chr3:132212851-132325640 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015393	unclassified non-coding RNA gene	Chr3:147871082-147992287 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015959	unclassified non-coding RNA gene	Chr3:129087466-129201168 (-)
PWK/PhJ	MGP_PWKPhJ_G0014627	unclassified non-coding RNA gene	Chr3:125131611-125244537 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014415	unclassified non-coding RNA gene	Chr3:127152406-127271844 (-)
WSB/EiJ	MGP_WSBEiJ_G0014947	unclassified non-coding RNA gene	Chr3:129816621-129929090 (-)

Homology

• Gene Tree
  D030025E07Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  1
• Endonuclease-mediated
  2
• Radiation induced
  1
• Genomic Mutations
  2 involving D030025E07Rik
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  739
• Tissues
  28
• cDNA Data
  4
• Literature Summary
  3

Images

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  1

• Ensembl
  ENSMUSG00000105816 (Evidence)
• NCBI Gene
  402774

Representative Sequences			Length	Strain/Species
genomic	402774	NCBI Gene Model | MGI Sequence Detail	114591	C57BL/6J
transcript	NR_045704	RefSeq | MGI Sequence Detail	2348	ZRU/MplStud

Molecular
Reagents

• All nucleic 7

  cDNA 4

  Primer pair 2

  Other 1

References

• Summaries
  All 15

  Developmental Gene Expression 3

  Diseases 1

  Phenotypes 5
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:330442 Garcia-Padilla C, et al., Identification of atrial-enriched lncRNA Walras linked to cardiomyocyte cytoarchitecture and atrial fibrillation. FASEB J. 2022 Jan;36(1):e22051