A730062M13Rik Gene Detail

Summary

• Symbol
  A730062M13Rik
• Name
  RIKEN cDNA A730062M13 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3029302
  NCBI Gene: 403346
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:72776934-72778843 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3029302	lncRNA gene	Chr9:72776934-72778843 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0002313	unclassified gene	Chr9:73068124-73070033 (+)
A/J	MGP_AJ_G0002290	unclassified gene	Chr9:70518443-70520338 (+)
AKR/J	MGP_AKRJ_G0002276	unclassified gene	Chr9:72211758-72213653 (+)
BALB/cJ	MGP_BALBcJ_G0002284	unclassified gene	Chr9:70224665-70226560 (+)
C3H/HeJ	MGP_C3HHeJ_G0002261	unclassified gene	Chr9:72699126-72701021 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0002410	unclassified gene	Chr9:74990129-74992038 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002020	unclassified gene	Chr9:69995827-69997748 (+)
CAST/EiJ	MGP_CASTEiJ_G0002225	unclassified gene	Chr9:73027553-73029483 (+)
CBA/J	MGP_CBAJ_G0002255	unclassified gene	Chr9:77609525-77611420 (+)
DBA/2J	MGP_DBA2J_G0002258	unclassified gene	Chr9:70235985-70237880 (+)
FVB/NJ	MGP_FVBNJ_G0002267	unclassified gene	Chr9:69543616-69545511 (+)
LP/J	MGP_LPJ_G0002312	unclassified gene	Chr9:73294190-73296099 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002242	unclassified gene	Chr9:78683304-78685199 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002398	unclassified gene	Chr9:72353822-72355717 (+)
PWK/PhJ	MGP_PWKPhJ_G0002185	unclassified gene	Chr9:70510289-70512242 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0002147	unclassified gene	Chr9:72649393-72651304 (+)
WSB/EiJ	MGP_WSBEiJ_G0002253	unclassified gene	Chr9:72290746-72292655 (+)

Homology

• Gene Tree
  A730062M13Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000102971 (Evidence)
• NCBI Gene
  403346

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102971	Ensembl Gene Model | MGI Sequence Detail	1910	C57BL/6J
transcript	AK043165	GenBank | ENA | DDBJ | MGI Sequence Detail	1910	C57BL/6J

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 10
• Earliest
  J:57656 Lennon G, et al., WashU-HHMI Mouse EST Project. Database Download. 1999;
• Latest
  J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;