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Or5an1c Gene Detail
Summary
  • Symbol
    Or5an1c
  • Name
    olfactory receptor family 5 subfamily AN member 1C
  • Synonyms
    GA_x6K02T2N4A9-18144-19082, MOR214-1, MOR214-9, Olfr262
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030096
    NCBI Gene: 258683
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr19:12218085-12219023 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 8.68 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    176 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030096
 protein coding gene Chr19:12218085-12219023 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024898
 protein coding gene Chr19:9693728-9694666 (-)
A/J MGP_AJ_G0024872
 protein coding gene Chr19:9055758-9056696 (-)
AKR/J MGP_AKRJ_G0024846
 protein coding gene Chr19:9531603-9532541 (-)
BALB/cJ MGP_BALBcJ_G0024872
 protein coding gene Chr19:9078629-9079567 (-)
C3H/HeJ MGP_C3HHeJ_G0024637
 protein coding gene Chr19:9412999-9413937 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0022747
 protein coding gene Chr19:9712705-9713643 (-)
CAST/EiJ MGP_CASTEiJ_G0024109
 protein coding gene Chr19:9006898-9007836 (-)
CBA/J MGP_CBAJ_G0024611
 protein coding gene Chr19:10277667-10278605 (-)
DBA/2J MGP_DBA2J_G0024741
 protein coding gene Chr19:9118011-9118949 (-)
FVB/NJ MGP_FVBNJ_G0024704
 protein coding gene Chr19:9141235-9142173 (-)
LP/J MGP_LPJ_G0024826
 protein coding gene Chr19:9732405-9733343 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024731
 protein coding gene Chr19:10087435-10088373 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025370
 protein coding gene Chr19:9501791-9502729 (-)
PWK/PhJ MGP_PWKPhJ_G0023855
 protein coding gene Chr19:8588740-8589678 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023659
 protein coding gene Chr19:8644921-8645859 (-)
WSB/EiJ MGP_WSBEiJ_G0024173
 protein coding gene Chr19:9359461-9360399 (-)



Homology
more
  • Human Ortholog
    OR5AN1, olfactory receptor family 5 subfamily AN member 1
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR5AN1, olfactory receptor family 5 subfamily AN member 1
  • Synonyms
    OR11-244
  • Links
    NCBI Gene ID: 390195
    neXtProt AC: NX_Q8NGI8
    UniProt: Q8NGI8

  • Chr Location
    11q12.1
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258683 NCBI Gene Model | MGI Sequence Detail 939 C57BL/6J ±  kb
transcript NM_146688 RefSeq | MGI Sequence Detail 939 C57BL/6  
polypeptide NP_666899 RefSeq | MGI Sequence Detail 312 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR050516 Olfactory G-protein coupled receptor
    IPR000725 Olfactory receptor
Molecular
Reagents
less

  • Microarray probesets 1
Other
Accession IDs
less
MGI:7276897
References
more
  • Summaries
    All 13
    Gene Ontology 3
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory