Or5ae1 Gene Detail

Summary

• Symbol
  Or5ae1
• Name
  olfactory receptor family 5 subfamily AE member 1
• Synonyms
  GA_x6K02T2NHDJ-11170115-11169168, MOR254-1, Olfr290

• Feature Type
  protein coding gene
• IDs
  MGI:3030124
  NCBI Gene: 258411
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:84564989-84565936 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030124	protein coding gene	Chr7:84562283-84570069 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0032439	protein coding gene	Chr7:85002438-85003493 (+)
AKR/J	MGP_AKRJ_G0032376	protein coding gene	Chr7:86999616-87000658 (+)
BALB/cJ	MGP_BALBcJ_G0032452	protein coding gene	Chr7:84677893-84678735 (+)
C3H/HeJ	MGP_C3HHeJ_G0032165	protein coding gene	Chr7:87439842-87506717 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0032943	protein coding gene	Chr7:90494608-90495058 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0029951	protein coding gene	Chr7:87274531-87371802 (+)
CAST/EiJ	MGP_CASTEiJ_G0031492	protein coding gene	Chr7:78495837-78497629 (+)
CBA/J	MGP_CBAJ_G0032131	protein coding gene	Chr7:93504267-93505119 (+)
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0032367	protein coding gene	Chr7:88373952-88374899 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0032277	protein coding gene	Chr7:93534346-93535636 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0032963	protein coding gene	Chr7:86348636-86349238 (+)
PWK/PhJ	MGP_PWKPhJ_G0031214	protein coding gene	Chr7:76849454-76850277 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0031609	protein coding gene	Chr7:86729140-86729742 (+)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  25 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Endonuclease-mediated
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Or5ae1
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  23 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  6
• GO References
  2

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  31
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS21421.1

• Ensembl
  ENSMUSG00000070459 (Evidence), ENSMUSG00000116179 (Evidence)
• NCBI Gene
  258411

Representative Sequences			Length	Strain/Species
genomic	258411	NCBI Gene Model | MGI Sequence Detail	948	C57BL/6J
transcript	NM_146416	RefSeq | MGI Sequence Detail	948	C57BL/6
polypeptide	NP_666528	RefSeq | MGI Sequence Detail	315	C57BL/6

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR017452 GPCR, rhodopsin-like, 7TM
  IPR000276 G protein-coupled receptor, rhodopsin-like
  IPR050516 Olfactory G-protein coupled receptor
  IPR000725 Olfactory receptor

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:7276922

References

• Summaries
  All 37

  Gene Ontology 2

  Phenotypes 25
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42