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Or3a4 Gene Detail
Summary
  • Symbol
    Or3a4
  • Name
    olfactory receptor family 3 subfamily A member 4
  • Synonyms
    GA_x6K02T2P1NL-4211516-4210581, MOR255-1, Olfr399
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030233
    NCBI Gene: 259006
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:73944602-73945604 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 45.73 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    6 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030233
 protein coding gene Chr11:73943953-73947441 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018683
 protein coding gene Chr11:74743556-74744558 (-)
A/J MGP_AJ_G0018650
 protein coding gene Chr11:71970726-71971728 (-)
AKR/J MGP_AKRJ_G0018619
 protein coding gene Chr11:74134611-74135613 (-)
BALB/cJ MGP_BALBcJ_G0018623
 protein coding gene Chr11:72271966-72272968 (-)
C3H/HeJ MGP_C3HHeJ_G0018436
 protein coding gene Chr11:74132258-74133260 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019074
 protein coding gene Chr11:77056906-77057908 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016709
 protein coding gene Chr11:69041882-69042884 (-)
CAST/EiJ MGP_CASTEiJ_G0017991
 protein coding gene Chr11:74511127-74512129 (-)
CBA/J MGP_CBAJ_G0018407
 protein coding gene Chr11:80439136-80440138 (-)
DBA/2J MGP_DBA2J_G0018515
 protein coding gene Chr11:71563651-71564653 (-)
FVB/NJ MGP_FVBNJ_G0018505
 protein coding gene Chr11:71107220-71108222 (-)
LP/J MGP_LPJ_G0018586
 protein coding gene Chr11:75261499-75262501 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018531
 protein coding gene Chr11:81009542-81010544 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019114
 protein coding gene Chr11:74346289-74347291 (-)
PWK/PhJ MGP_PWKPhJ_G0017762
 protein coding gene Chr11:72253681-72254683 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017553
 protein coding gene Chr11:73911940-73912942 (-)
WSB/EiJ MGP_WSBEiJ_G0018044
 protein coding gene Chr11:74119852-74120854 (-)



Homology
more
  • Human Ortholog
    OR3A4P, olfactory receptor family 3 subfamily A member 4 pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR3A4P, olfactory receptor family 3 subfamily A member 4 pseudogene
  • Synonyms
    OLFRA05, OLFRA06, OR17-13, OR17-16, OR17-24, OR17-25, OR24, OR25, OR3A4, OR3A5P
  • Links
    NCBI Gene ID: 390756

  • Chr Location
    17p13.3
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    718
  • Tissues
    11
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 259006 NCBI Gene Model | MGI Sequence Detail 1003 C57BL/6J ±  kb
transcript NM_147004 RefSeq | MGI Sequence Detail 1003 C57BL/6  
polypeptide NP_667215 RefSeq | MGI Sequence Detail 311 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR050516 Olfactory G-protein coupled receptor
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 4
    cDNA 3
    Primer pair 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:7277032
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory