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Or6c6b Pseudogene Detail
Summary
  • Symbol
    Or6c6b
  • Name
    olfactory receptor family 6 subfamily C member 6B
  • Synonyms
    GA_x6K02T2PULF-10991899-10992843, Gm9792, MOR110-11P, Olfr779
Location &
Maps
more
  • Sequence Map
    Chr10:129147049-129147977 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 77.30 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    143 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030613
 polymorphic pseudogene Chr10:129147034-129147977 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0009911
 polymorphic pseudogene Chr10:128216040-128216984 (+)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0009896
 polymorphic pseudogene Chr10:128613506-128614450 (+)
C3H/HeJ MGP_C3HHeJ_G0009828
 polymorphic pseudogene Chr10:131704076-131705020 (+)
C57BL/6NJ MGP_C57BL6NJ_G0010140
 polymorphic pseudogene Chr10:138120164-138120499 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0009802
 polymorphic pseudogene Chr10:143701252-143703777 (+)
DBA/2J MGP_DBA2J_G0009829
 polymorphic pseudogene Chr10:126845200-126846099 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0009923
 polymorphic pseudogene Chr10:134120981-134123398 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0010113
 polymorphic pseudogene Chr10:132017502-132018446 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    OR6C6, olfactory receptor family 6 subfamily C member 6
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR6C6, olfactory receptor family 6 subfamily C member 6
  • Links
    NCBI Gene ID: 283365
    neXtProt AC: NX_A6NF89
    UniProt: A6NF89

  • Chr Location
    12q13.2; chr12:55293988-55296569 (-)  GRCh38
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    18
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044537 Ensembl Gene Model | MGI Sequence Detail 929 C57BL/6J ±  kb
transcript ENSMUST00000222301 Ensembl | MGI Sequence Detail 929 Not Applicable  
polypeptide ENSMUSP00000152224 Ensembl | MGI Sequence Detail 309 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3710555, MGI:7277426
References
more
  • Summaries
    All 9
    Gene Ontology 2
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory