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Or4c11b Gene Detail
Summary
  • Symbol
    Or4c11b
  • Name
    olfactory receptor family 4 subfamily C member 11B
  • Synonyms
    GA_x6K02T2Q125-50268830-50269753, MOR230-2, Olfr1201
  • Feature Type
    protein coding gene
  • IDs
    MGI:3031035
    NCBI Gene: 258897
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:88624728-88625651 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 50.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    134 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3031035
 protein coding gene Chr2:88623380-88627171 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0026031
 protein coding gene Chr2:86479835-86482250 (+)
AKR/J MGP_AKRJ_G0026006
 protein coding gene Chr2:88801999-88804382 (+)
BALB/cJ MGP_BALBcJ_G0026037
 protein coding gene Chr2:86600309-86602692 (+)
C3H/HeJ MGP_C3HHeJ_G0025792
 protein coding gene Chr2:88916539-88918922 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026487
 protein coding gene Chr2:93022796-93023719 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0025906
 protein coding gene Chr2:86016936-86019471 (+)
FVB/NJ MGP_FVBNJ_G0025868
 protein coding gene Chr2:85044343-85046726 (+)
LP/J MGP_LPJ_G0026006
 protein coding gene Chr2:90088207-90090590 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025894
 protein coding gene Chr2:99041675-99045817 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026540
 protein coding gene Chr2:88871473-88873098 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0024794
 protein coding gene Chr2:88643210-88645594 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    OR4C11, olfactory receptor family 4 subfamily C member 11
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR4C11, olfactory receptor family 4 subfamily C member 11
  • Synonyms
    OR11-136, OR4C11P
  • Links
    NCBI Gene ID: 219429
    neXtProt AC: NX_Q6IEV9
    UniProt: Q6IEV9

  • Chr Location
    11q11
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Or4c11b
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    7 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258897 NCBI Gene Model | MGI Sequence Detail 924 C57BL/6J ±  kb
transcript NM_146895 RefSeq | MGI Sequence Detail 924 C57BL/6  
polypeptide NP_667106 RefSeq | MGI Sequence Detail 307 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR050427 Human Olfactory Receptors
    IPR000725 Olfactory receptor
Molecular
Reagents
less

  • Microarray probesets 1
Other
Accession IDs
less
MGI:7276474
References
more
  • Summaries
    All 17
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory