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Or4b1c Pseudogene Detail
Summary
  • Symbol
    Or4b1c
  • Name
    olfactory receptor family 4 subfamily B member 1C
  • Synonyms
    GA_x6K02T2Q125-51650793-51649870, MOR227-4, Olfr1273-ps
Location &
Maps
more
  • Sequence Map
    Chr2:90126280-90127203 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 50.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    134 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3031107
 polymorphic pseudogene Chr2:90122578-90129058 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040268
 pseudogene Chr2:91505716-91506640 (-)
A/J MGP_AJ_G0040247
 pseudogene Chr2:87888086-87889010 (-)
AKR/J MGP_AKRJ_G0040182
 pseudogene Chr2:90321082-90322006 (-)
BALB/cJ MGP_BALBcJ_G0040246
 pseudogene Chr2:88054372-88055296 (-)
C3H/HeJ MGP_C3HHeJ_G0039884
 pseudogene Chr2:90554312-90555236 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040838
 pseudogene Chr2:94713381-94714305 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0039851
 pseudogene Chr2:97965740-97966664 (-)
DBA/2J MGP_DBA2J_G0040047
 pseudogene Chr2:87463635-87464559 (-)
FVB/NJ MGP_FVBNJ_G0040003
 pseudogene Chr2:86585918-86586842 (-)
LP/J MGP_LPJ_G0040095
 pseudogene Chr2:91687953-91688877 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0040001
 pseudogene Chr2:101041386-101042310 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040940
 pseudogene Chr2:90364520-90365444 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Or4b1c
  • Find Mice (IMSR)
    3 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    3
Representative SequencesLengthStrain/SpeciesFlank
genomic 258977 NCBI Gene Model | MGI Sequence Detail 924 C57BL/6J ±  kb
transcript NM_146975 RefSeq | MGI Sequence Detail 924 Not Specified  
polypeptide NP_667186 RefSeq | MGI Sequence Detail 307 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:7276548
References
more
  • Summaries
    All 16
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory