Or5m11 Gene Detail

Summary

• Symbol
  Or5m11
• Name
  olfactory receptor family 5 subfamily M member 11
• Synonyms
  GA_x6K02T2Q125-47430129-47431103, MOR198-3P, MOR198-3P, MOR198-4, MOR198-6_p, Olfr1028, Olfr1534-ps1

• Feature Type
  protein coding gene
• IDs
  MGI:3031368
  NCBI Gene: 257936
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:85781409-85782383 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 49.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  123 from dbSNP Build 142
• Strain Annotations
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3031368	protein coding gene	Chr2:85780781-85784254 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0025947	protein coding gene	Chr2:86759619-86761009 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0026367	protein coding gene	Chr2:89503581-89506265 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0023769	protein coding gene	Chr2:80131833-80136255 (+)
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	MGP_FVBNJ_G0025751	protein coding gene	Chr2:82129603-82135853 (+)
LP/J	MGP_LPJ_G0025884	protein coding gene	Chr2:86733683-86734657 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0026421	protein coding gene	Chr2:85798002-85798846 (+)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0024687	protein coding gene	Chr2:85895688-85898198 (+)
WSB/EiJ	no annotation

Homology

• Human Ortholog
  OR5M11, olfactory receptor family 5 subfamily M member 11

• Vertebrate Orthologs
  2

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  OR5M11, olfactory receptor family 5 subfamily M member 11
  
• Synonyms
  OR11-199
• Links
  HGNC:15291

  NCBI Gene ID: 219487

  neXtProt AC: NX_Q96RB7

  UniProt: Q96RB7

  
  
• Chr Location
  11q12.1; chr11:56542340-56543257 (-)  GRCh38

---

• MGI Vertebrate Homology
  Or5m11 stringent orthology
  1 human;1 mouse;1 rat
  
• HCOP
  vertebrate homology predictions: OR5M11
• Gene Tree
  Or5m11
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Targeted
  2
• Genomic Mutations
  3 involving Or5m11
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  10 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  2
• UniProt
  1
• CCDS
  CCDS16229.1

• Ensembl
  ENSMUSG00000057207 (Evidence)
• NCBI Gene
  257936

Representative Sequences			Length	Strain/Species
genomic	257936	NCBI Gene Model | MGI Sequence Detail	975	C57BL/6J
transcript	NM_001011774	RefSeq | MGI Sequence Detail	975	C57BL/6
polypeptide	NP_001011774	RefSeq | MGI Sequence Detail	324	C57BL/6

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR017452 GPCR, rhodopsin-like, 7TM
  IPR000276 G protein-coupled receptor, rhodopsin-like
  IPR000725 Olfactory receptor

Molecular
Reagents

• 
  

  Microarray probesets 1

Other
Accession IDs

MGI:3030862, MGI:7276295

References

• Summaries
  All 17

  Phenotypes 5
• Earliest
  J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42