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AU019990 Gene Detail
Summary
  • Symbol
    AU019990
  • Name
    expressed sequence AU019990
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3034641
    NCBI Gene: 767814
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:132440116-132494987 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 64.74 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1957 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3034641
 lncRNA gene Chr2:132440115-132494988 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006018
 lincRNA gene Chr2:136201780-136261028 (+)
A/J MGP_AJ_G0006011
 lincRNA gene Chr2:130648265-130705650 (+)
AKR/J MGP_AKRJ_G0005985
 lincRNA gene Chr2:134426865-134484580 (+)
BALB/cJ MGP_BALBcJ_G0005988
 lincRNA gene Chr2:131048325-131103242 (+)
C3H/HeJ MGP_C3HHeJ_G0005937
 lincRNA gene Chr2:134856232-134920862 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006149
 lincRNA gene Chr2:140329805-140395235 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005479
 lincRNA gene Chr2:125377028-125433047 (+)
CAST/EiJ MGP_CASTEiJ_G0005872
 lincRNA gene Chr2:135197613-135258857 (+)
CBA/J MGP_CBAJ_G0005921
 lincRNA gene Chr2:145614337-145681103 (+)
DBA/2J MGP_DBA2J_G0005942
 lincRNA gene Chr2:130039407-130094179 (+)
FVB/NJ MGP_FVBNJ_G0005967
 lincRNA gene Chr2:128670125-128729039 (+)
LP/J MGP_LPJ_G0006023
 lincRNA gene Chr2:136419350-136498132 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0005954
 lincRNA gene Chr2:149350027-149409294 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006148
 lincRNA gene Chr2:134383864-134453181 (+)
PWK/PhJ MGP_PWKPhJ_G0005820
 lincRNA gene Chr2:129639819-129699009 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005731
 lincRNA gene Chr2:133535927-133598784 (+)
WSB/EiJ MGP_WSBEiJ_G0005924
 lincRNA gene Chr2:135306759-135367414 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving AU019990
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
Sequences &
Gene Models
less
  • All Sequences
    32
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 767814 NCBI Gene Model | MGI Sequence Detail 54872 C57BL/6J ±  kb
transcript NR_033469 RefSeq | MGI Sequence Detail 2061 Not Specified  
polypeptide Q3TLE0 UniProt | EBI | MGI Sequence Detail 51 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10
References
more
  • Summaries
    All 13
    Phenotypes 3
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory