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Gm1826 Pseudogene Detail
Summary
  • Symbol
    Gm1826
  • Name
    predicted gene 1826
  • Synonyms
    LOC225217
  • Feature Type
    pseudogene
  • IDs
    MGI:3037684
    NCBI Gene: 668432
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:87223827-87224988 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 49.86 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    179 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3037684
 pseudogene Chr2:87223801-87226648 (+)
129S1/SvImJ MGP_129S1SvImJ_G0011750
 pseudogene Chr2:88427464-88428625 (+)
A/J MGP_AJ_G0011744
 pseudogene Chr2:84887790-84888947 (+)
AKR/J MGP_AKRJ_G0011711
 pseudogene Chr2:87214491-87215648 (+)
BALB/cJ MGP_BALBcJ_G0011723
 pseudogene Chr2:85098835-85099992 (+)
C3H/HeJ MGP_C3HHeJ_G0011608
 pseudogene Chr2:87455477-87461579 (+)
C57BL/6NJ MGP_C57BL6NJ_G0012020
 pseudogene Chr2:91370880-91372041 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0010243
 pseudogene Chr18:11174655-11202078 (-)
CAST/EiJ MGP_CASTEiJ_G0011396
 pseudogene Chr2:87930587-87931748 (+)
CBA/J MGP_CBAJ_G0011583
 pseudogene Chr2:94415371-94416536 (+)
DBA/2J MGP_DBA2J_G0011635
 pseudogene Chr2:84496187-84497344 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0011706
 pseudogene Chr2:88454596-88455753 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0011642
 pseudogene Chr2:97179231-97180388 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0012016
 pseudogene Chr2:87342141-87343298 (+)
PWK/PhJ MGP_PWKPhJ_G0011248
 pseudogene Chr2:84405753-84406918 (+)
SPRET/EiJ MGP_SPRETEiJ_G0011073
 pseudogene Chr2:87376416-87383373 (+)
WSB/EiJ MGP_WSBEiJ_G0011422
 pseudogene Chr2:88050940-88052101 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000082028 Ensembl Gene Model | MGI Sequence Detail 1162 C57BL/6J ±  kb
transcript ENSMUST00000118646 Ensembl | MGI Sequence Detail 1162 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 5
  • Earliest
    J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory