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Tsbp1 Gene Detail
Summary
  • Symbol
    Tsbp1
  • Name
    testis expressed basic protein 1
  • Synonyms
    BC051142
  • Feature Type
    protein coding gene
  • IDs
    MGI:3039565
    NCBI Gene: 407788
  • Alliance
    gene page
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:34617794-34679708 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 18.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3039565
 protein coding gene Chr17:34617749-34679708 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023573
 protein coding gene Chr17:34413685-34477491 (+)
A/J MGP_AJ_G0023535
 protein coding gene Chr17:33241655-33305179 (+)
AKR/J MGP_AKRJ_G0023500
 protein coding gene Chr17:33633895-33698921 (+)
BALB/cJ MGP_BALBcJ_G0023539
 protein coding gene Chr17:33399354-33461799 (+)
C3H/HeJ MGP_C3HHeJ_G0023299
 protein coding gene Chr17:33993114-34057852 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023979
 protein coding gene Chr17:35709005-35779720 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021458
 protein coding gene Chr17:31208620-31270863 (+)
CAST/EiJ MGP_CASTEiJ_G0022799
 protein coding gene Chr17:34077422-34143148 (+)
CBA/J MGP_CBAJ_G0023277
 protein coding gene Chr17:37170061-37235602 (+)
DBA/2J MGP_DBA2J_G0023406
 protein coding gene Chr17:32584000-32646036 (+)
FVB/NJ MGP_FVBNJ_G0023372
 protein coding gene Chr17:32444330-32507852 (+)
LP/J MGP_LPJ_G0023483
 protein coding gene Chr17:34682005-34744394 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023395
 protein coding gene Chr17:36132390-36195164 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024022
 protein coding gene Chr17:33961179-34027972 (+)
PWK/PhJ MGP_PWKPhJ_G0022549
 protein coding gene Chr17:31525105-31589155 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022364
 protein coding gene Chr17:31926067-31991066 (+)
WSB/EiJ MGP_WSBEiJ_G0022860
 protein coding gene Chr17:34008321-34071954 (+)



Homology
more
  • Human Ortholog
    TSBP1, testis expressed basic protein 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TSBP1, testis expressed basic protein 1
  • Synonyms
    C6orf10, TSBP
  • Links
    NCBI Gene ID: 10665
    neXtProt AC: NX_Q5SRN2
    UniProt: Q5SRN2

  • Chr Location
    6p21.32; chr6:32288526-32371907 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    3 phenotype references
Male mice homozygous for a mutation are viable and show normal fertility.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    800
  • Tissues
    15
  • cDNA Data
    34
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057246 Ensembl Gene Model | MGI Sequence Detail 61915 C57BL/6J ±  kb
transcript ENSMUST00000078615 Ensembl | MGI Sequence Detail 1899 Not Applicable  
polypeptide ENSMUSP00000077685 Ensembl | MGI Sequence Detail 393 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    11 Sequences
  • InterPro Domains
    IPR038754 Testis-expressed basic protein 1
Molecular
Reagents
less
  • All nucleic 34
    cDNA 34

    Microarray probesets 2
Other
Accession IDs
less
MGI:7336155
References
more
  • Summaries
    All 21
    Developmental Gene Expression 1
    Phenotypes 3
  • Earliest
    J:61935 Stammers M, et al., BTL-II: a polymorphic locus with homology to the butyrophilin gene family, located at the border of the major histocompatibility complex class II and class III regions in human and mouse. Immunogenetics. 2000 Apr;51(4-5):373-82
  • Latest
    J:291989 Jandke A, et al., Butyrophilin-like proteins display combinatorial diversity in selecting and maintaining signature intraepithelial gammadelta T cell compartments. Nat Commun. 2020 Jul 28;11(1):3769
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory