BC028789 Gene Detail

Summary

• Symbol
  BC028789
• Name
  cDNA sequence BC028789

• Feature Type
  unclassified gene
• IDs
  MGI:3039584
  NCBI Gene: 407802
• Alliance
  gene page
• Transcription Start Sites
  3 TSS

Location &
Maps

• Sequence Map
  Chr11:11642608-11644766 bp, + strand

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  144 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3039584	unclassified gene	Chr11:11642608-11644766 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Gene Ontology
(GO)
Classifications

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  2

• NCBI Gene
  407802

Representative Sequences			Length	Strain/Species
transcript	BC028789	GenBank | ENA | DDBJ | MGI Sequence Detail	2168	C57BL/6

References

• Summaries
  All 4
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:85000 Mouse Genome Informatics Scientific Curators, MGI Sequence Curation Reference. 2003;

TSS for BC028789:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr100377	Chr11:11640833-11640848 (+)	-1,767 bp
Tssr100378	Chr11:11642003-11642009 (+)	-602 bp
Tssr100379	Chr11:11642837-11642846 (+)	234 bp