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Msantd5l Gene Detail
Summary
  • Symbol
    Msantd5l
  • Name
    Myb/SANT DNA binding domain containing 5 like
  • Synonyms
    BC049762
  • Feature Type
    protein coding gene
  • IDs
    MGI:3039622
    NCBI Gene: 193286
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:51144478-51153873 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 31.02 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    312 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3039622
 protein coding gene Chr11:51144472-51154489 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018265
 protein coding gene Chr11:50474406-50484391 (-)
A/J MGP_AJ_G0018234
 protein coding gene Chr11:48584536-48593931 (-)
AKR/J MGP_AKRJ_G0018204
 protein coding gene Chr11:50109981-50119731 (-)
BALB/cJ MGP_BALBcJ_G0018205
 protein coding gene Chr11:48884201-48894134 (-)
C3H/HeJ MGP_C3HHeJ_G0018016
 protein coding gene Chr11:50144911-50154306 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018655
 protein coding gene Chr11:52015012-52024407 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016307
 protein coding gene Chr11:46159953-46168693 (-)
CAST/EiJ MGP_CASTEiJ_G0017580
 protein coding gene Chr11:50129924-50140946 (-)
CBA/J MGP_CBAJ_G0017991
 protein coding gene Chr11:54454181-54463576 (-)
DBA/2J MGP_DBA2J_G0018098
 protein coding gene Chr11:48299033-48308426 (-)
FVB/NJ MGP_FVBNJ_G0018093
 protein coding gene Chr11:47995405-48004800 (-)
LP/J MGP_LPJ_G0018174
 protein coding gene Chr11:50902135-50913416 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018116
 protein coding gene Chr11:55868005-55877398 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018698
 protein coding gene Chr11:50200107-50212899 (-)
PWK/PhJ MGP_PWKPhJ_G0017356
 protein coding gene Chr11:48804317-48814105 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017151
 protein coding gene Chr11:49934425-49943819 (-)
WSB/EiJ MGP_WSBEiJ_G0017628
 protein coding gene Chr11:49853009-49862402 (-)



Homology
more
  • Human Ortholog
    MSANTD5, Myb/SANT DNA binding domain containing 5
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving Msantd5l
  • Find Mice (IMSR)
    10 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    20
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045942 Ensembl Gene Model | MGI Sequence Detail 9396 C57BL/6J ±  kb
transcript ENSMUST00000231433 Ensembl | MGI Sequence Detail 855 Not Applicable  
polypeptide ENSMUSP00000155926 Ensembl | MGI Sequence Detail 219 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 20
    cDNA 20

    Microarray probesets 2
Other
Accession IDs
less
MGI:7513914
References
more
  • Summaries
    All 25
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory