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4930405O22Rik Gene Detail
Summary
  • Symbol
    4930405O22Rik
  • Name
    RIKEN cDNA 4930405O22 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3041158
    NCBI Gene: 414079
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:63612441-63619968 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 32.68 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    211 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3041158
 lncRNA gene Chr17:63612441-63619968 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036923
 sense intronic lncRNA gene Chr17:65353614-65362185 (-)
A/J MGP_AJ_G0036911
 sense intronic lncRNA gene Chr17:63414348-63421875 (-)
AKR/J MGP_AKRJ_G0036858
 sense intronic lncRNA gene Chr17:64252560-64260000 (-)
BALB/cJ MGP_BALBcJ_G0036902
 sense intronic lncRNA gene Chr17:63331921-63339448 (-)
C3H/HeJ MGP_C3HHeJ_G0036587
 sense intronic lncRNA gene Chr17:65139198-65147012 (-)
C57BL/6NJ MGP_C57BL6NJ_G0037415
 sense intronic lncRNA gene Chr17:67883665-67891882 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0034475
 sense intronic lncRNA gene Chr17:59572153-59585843 (-)
CAST/EiJ MGP_CASTEiJ_G0035776
 sense intronic lncRNA gene Chr17:65481648-65489159 (-)
CBA/J MGP_CBAJ_G0036562
 sense intronic lncRNA gene Chr17:70574659-70583955 (-)
DBA/2J MGP_DBA2J_G0036739
 sense intronic lncRNA gene Chr17:62186362-62193774 (-)
FVB/NJ MGP_FVBNJ_G0036690
 sense intronic lncRNA gene Chr17:61678377-61685720 (-)
LP/J MGP_LPJ_G0036785
 sense intronic lncRNA gene Chr17:66093253-66101380 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0036696
 sense intronic lncRNA gene Chr17:70711735-70720022 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0037531
 sense intronic lncRNA gene Chr17:64749835-64757907 (-)
PWK/PhJ MGP_PWKPhJ_G0035470
 sense intronic lncRNA gene Chr17:61446478-61454157 (-)
SPRET/EiJ MGP_SPRETEiJ_G0035281
 sense intronic lncRNA gene Chr17:61429211-61436697 (-)
WSB/EiJ MGP_WSBEiJ_G0035976
 sense intronic lncRNA gene Chr17:65380732-65389841 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    29
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 414079 NCBI Gene Model | MGI Sequence Detail 7528 C57BL/6J ±  kb
transcript NR_130176 RefSeq | MGI Sequence Detail 956 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
References
more
  • Summaries
    All 9
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory