9630041A04Rik Gene Detail

Summary

• Symbol
  9630041A04Rik
• Name
  RIKEN cDNA 9630041A04 gene

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3045242
  NCBI Gene: 442798
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr9:101739040-101820427 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 9, 54.15 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  2247 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3045242	protein coding gene	Chr9:101739040-101820427 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0035185	protein coding gene	Chr9:103461172-103465927 (+)
A/J	MGP_AJ_G0035165	protein coding gene	Chr9:99763817-99768556 (+)
AKR/J	MGP_AKRJ_G0035097	protein coding gene	Chr9:102225411-102230170 (+)
BALB/cJ	MGP_BALBcJ_G0035158	protein coding gene	Chr9:99474412-99479159 (+)
C3H/HeJ	MGP_C3HHeJ_G0034868	protein coding gene	Chr9:102642953-102647698 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0035678	protein coding gene	Chr9:106383153-106387893 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0032577	protein coding gene	Chr9:97372763-97377514 (+)
CAST/EiJ	MGP_CASTEiJ_G0034180	protein coding gene	Chr9:102448126-102452859 (+)
CBA/J	MGP_CBAJ_G0034837	protein coding gene	Chr9:110092831-110097570 (+)
DBA/2J	MGP_DBA2J_G0034998	protein coding gene	Chr9:99267221-99271964 (+)
FVB/NJ	MGP_FVBNJ_G0034946	protein coding gene	Chr9:98065797-98070533 (+)
LP/J	MGP_LPJ_G0035074	protein coding gene	Chr9:103677270-103682008 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0034985	protein coding gene	Chr9:111949078-111953817 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0035700	protein coding gene	Chr9:102478941-102483665 (+)
PWK/PhJ	MGP_PWKPhJ_G0033887	protein coding gene	Chr9:99501636-99506434 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0033722	protein coding gene	Chr9:102520803-102525605 (+)
WSB/EiJ	MGP_WSBEiJ_G0034300	protein coding gene	Chr9:102359324-102364072 (+)

Homology

• Gene Tree
  9630041A04Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Targeted
  2
• Genomic Mutations
  1 involving 9630041A04Rik
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  13 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  737
• Tissues
  3
• cDNA Data
  3
• Literature Summary
  1

Images

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• UniProt
  1

• Ensembl
  ENSMUSG00000057710 (Evidence)
• NCBI Gene
  442798

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000057710	Ensembl Gene Model | MGI Sequence Detail	81388	C57BL/6J
transcript	ENSMUST00000214563	Ensembl | MGI Sequence Detail	1342	Not Applicable
polypeptide	Q8C574	UniProt | EBI | MGI Sequence Detail	206	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

References

• Summaries
  All 13

  Developmental Gene Expression 1

  Phenotypes 4
• Earliest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
• Latest
  J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42