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Crocc2 Gene Detail
Summary
  • Symbol
    Crocc2
  • Name
    ciliary rootlet coiled-coil, rootletin family member 2
  • Synonyms
    E030010N08Rik, LOC381284
  • Feature Type
    protein coding gene
  • IDs
    MGI:3045962
    NCBI Gene: 381284
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:93096447-93158794 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 47.17 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1618 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3045962
 protein coding gene Chr1:93096145-93158794 (+)
129S1/SvImJ MGP_129S1SvImJ_G0016336
 protein coding gene Chr1:94778442-94843224 (+)
A/J MGP_AJ_G0016317
 protein coding gene Chr1:91383806-91448139 (+)
AKR/J MGP_AKRJ_G0016278
 protein coding gene Chr1:94079994-94144771 (+)
BALB/cJ MGP_BALBcJ_G0016273
 protein coding gene Chr1:91562769-91626966 (+)
C3H/HeJ MGP_C3HHeJ_G0016102
 protein coding gene Chr1:94337341-94399874 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016732
 protein coding gene Chr1:98382789-98454309 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014450
 protein coding gene Chr1:85640672-85700716 (+)
CAST/EiJ MGP_CASTEiJ_G0015685
 protein coding gene Chr1:93664859-93726646 (+)
CBA/J MGP_CBAJ_G0016076
 protein coding gene Chr1:101572656-101641129 (+)
DBA/2J MGP_DBA2J_G0016181
 protein coding gene Chr1:90582131-90644684 (+)
FVB/NJ MGP_FVBNJ_G0016180
 protein coding gene Chr1:89653576-89720478 (+)
LP/J MGP_LPJ_G0016252
 protein coding gene Chr1:95960011-96025151 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016205
 protein coding gene Chr1:104690308-104756664 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016771
 protein coding gene Chr1:94102540-94165735 (+)
PWK/PhJ MGP_PWKPhJ_G0015470
 protein coding gene Chr1:90017917-90080894 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015254
 protein coding gene Chr1:93051094-93113204 (+)
WSB/EiJ MGP_WSBEiJ_G0015745
 protein coding gene Chr1:93915688-93979269 (+)



Homology
more
  • Human Ortholog
    CROCC2, ciliary rootlet coiled-coil, rootletin family member 2
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CROCC2, ciliary rootlet coiled-coil, rootletin family member 2
  • Links
    NCBI Gene ID: 728763
    UniProt: H7BZ55

  • Chr Location
    2q37.3; chr2:240906330-240993311 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    8 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    868
  • Tissues
    17
  • cDNA Data
    8
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000084989 Ensembl Gene Model | MGI Sequence Detail 62348 C57BL/6J ±  kb
    transcript ENSMUST00000138595 Ensembl | MGI Sequence Detail 7132 Not Applicable  
    polypeptide ENSMUSP00000120588 Ensembl | MGI Sequence Detail 1638 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 9
      cDNA 8
      Primer pair 1

      Microarray probesets 1
    Other
    Accession IDs
    less
    MGI:2685822
    References
    more
    • Summaries
      All 26
      Developmental Gene Expression 2
      Gene Ontology 1
      Phenotypes 8
    • Earliest
      J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
    • Latest
      J:240319 Stauber M, et al., Identification of FOXJ1 effectors during ciliogenesis in the foetal respiratory epithelium and embryonic left-right organiser of the mouse. Dev Biol. 2017 Mar 15;423(2):170-188
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory